RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA665531", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA665531 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1162246 1162246 PRJNA665531_P_NODE_13621_length_281_cov_1.028846_g13385_i0 PRJNA665531 13621 281 1.028846 2.89105726 Tritrichomonas 5723 Parabasalia other_Eukaryota 324 4.97e-84   NTclustered gi|2274983416|gb|OP038912.1| 5725 g13385 i0 88.321 34.2277580071174 274 27 96 5 1 271 272 1 Tritrichomonas augusta isolate T1 large subunit ribosomal RNA gene, partial sequence blastn 9618 324 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas augusta
29071165 29071165 PRJNA665531_P_NODE_12168_length_297_cov_2.977679_g11932_i0 PRJNA665531 12168 297 2.977679 8.84370663 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 44.7 0.0142   NR KAJ5071225.1 1746090 g11932 i0 27.2 0.929292929292929 92 65 90.9 1 287 18 357 448 KAJ5071225.1 hypothetical protein M0811_10497 [Anaeramoeba ignava] diamond 276 44.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;