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contig_metadata

13 rows where bioproject = "PRJNA664479" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA664479 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
629192 629192 PRJNA664479_S_NODE_7901_length_202_cov_13.738562_g7825_i0 PRJNA664479 7901 202 13.738562 27.75189524 Mastadenovirus caesari 3241411 Viruses Viruses 364 1.99e-96   NTclustered gi|1706705536|gb|MK165453.1| 129951 g7825 i0 100 97.5247524752475 197 0 98 0 1 197 11357 11161 Human mastadenovirus C isolate SX-2004-327 blastn 19700 364 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
3180052 3180052 PRJNA664479_S_NODE_14483_length_167_cov_0.864407_g14407_i0 PRJNA664479 14483 167 0.864407 1.44355969 Lasallevirus Acj61 3430339 Viruses Viruses 294 2.11e-75   NTclustered gi|311992750|ref|NC_014661.1| 760732 g14407 i0 98.788 1.97604790419162 165 2 99 0 1 165 19386 19222 Acinetobacter phage Acj61, complete genome blastn 330 294 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Straboviridae Lasallevirus Lasallevirus Acj61
3180060 3180060 PRJNA664479_S_NODE_7963_length_202_cov_1.333333_g7887_i0 PRJNA664479 7963 202 1.333333 2.69333266 Salasvirus phi29 10756 Viruses Viruses 374 3.3e-99   NTclustered gi|15659|emb|V01155.1| 2884424 g7887 i0 100 17.8910891089109 202 0 100 0 1 202 2221 2422 Left end of bacteriophage phi-29 coding for 15 potential proteins Among these are the terminal protein and the proteins encoded by the genes 1, 2 (sus), 3, and (probably) 4 blastn 3614 374 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Salasmaviridae Salasvirus Salasvirus phi29
11365755 11365755 PRJNA664479_S_NODE_14189_length_167_cov_1.686441_g14113_i0 PRJNA664479 14189 167 1.686441 2.81635647 Viruses 10239 Viruses Viruses 52.8 0.014   NTclustered gi|1789809212|gb|MN693568.1| 2694428 g14113 i0 100 0.335329341317365 28 0 17 0 134 161 19091 19064 MAG: Marine virus AFVG_25M275, complete genome blastn 56 52.8 1 Viruses Marine virus AFVG             Marine virus AFVG_25M275
12641484 12641484 PRJNA664479_S_NODE_9490_length_191_cov_1.401408_g9414_i0 PRJNA664479 9490 191 1.401408 2.67668928 root 1 Root_unresolved Root_unresolved 339 1.13e-88   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g9414 i0 99.462 97.3874345549738 186 1 97 0 6 191 12146 11961 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 18601 340 0.997058823529412 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
13383209 13383209 PRJNA664479_S_NODE_18751_length_161_cov_0.910714_g18675_i0 PRJNA664479 18751 161 0.910714 1.46624954 Caudoviricetes sp. 2832643 Viruses Viruses 298 1.56e-76   NTclustered gi|2057076588|tpg|BK037828.1| 2832643 g18675 i0 100 15.527950310559 161 0 100 0 1 161 22957 23117 MAG TPA_asm: Caudoviricetes sp. isolate ct8nR5, partial genome blastn 2500 298 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24114204 24114204 PRJNA664479_S_NODE_13119_length_171_cov_16.057377_g13043_i0 PRJNA664479 13119 171 16.057377 27.45811467 root 1 Root_unresolved Root_unresolved 309 7.7e-80   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g13043 i0 100 97.6608187134503 167 0 98 0 1 167 14892 14726 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 16700 309 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
25388695 25388695 PRJNA664479_S_NODE_14180_length_167_cov_1.728814_g14104_i0 PRJNA664479 14180 167 1.728814 2.88711938 root 1 Root_unresolved Root_unresolved 309 7.53e-80   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g14104 i0 100 100 167 0 100 0 1 167 13171 13337 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 16700 309 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
25388698 25388698 PRJNA664479_S_NODE_15560_length_165_cov_1.318966_g15484_i0 PRJNA664479 15560 165 1.318966 2.1762939 root 1 Root_unresolved Root_unresolved 305 9.59e-79   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g15484 i0 100 100 165 0 100 0 1 165 13630 13466 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 16500 305 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
28261979 28261979 PRJNA664479_S_NODE_466_length_664_cov_2.814634_g402_i0 PRJNA664479 466 664 2.814634 18.68916976 Gammaretrovirus 153135 Viruses Viruses 447 1.4099999999999999e-147   NR AAA79247.1 11786 g402 i0 98.6 10.9834337349398 221 3 99.8 0 664 2 140 360 AAA79247.1 putative reverse transcriptase [Murine leukemia virus] diamond 7293 451 0.991130820399113 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
28861930 28861930 PRJNA664479_S_NODE_3168_length_284_cov_2.910638_g3092_i0 PRJNA664479 3168 284 2.910638 8.26621192 Gammaretrovirus 153135 Viruses Viruses 184 1.23e-51   NR NP_057933.2 11801 g3092 i0 96.8 7.94366197183099 94 3 99.3 0 282 1 1218 1311 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 2256 184 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
30429419 30429419 PRJNA664479_S_NODE_5253_length_233_cov_1.896739_g5177_i0 PRJNA664479 5253 233 1.896739 4.41940187 Moloney murine leukemia virus 11801 Viruses Viruses 160 1.8499999999999993e-43   NR NP_057933.2 11801 g5177 i0 98.7 1.98283261802575 77 1 99.1 0 233 3 1132 1208 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 462 160 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31325884 31325884 PRJNA664479_S_NODE_10135_length_187_cov_1.478261_g10059_i0 PRJNA664479 10135 187 1.478261 2.76434807 Viruses 10239 Viruses Viruses 96.3 2.4e-21   NR QIG74990.1 2509738 g10059 i0 74.2 1.98930481283422 62 16 99.5 0 1 186 307 368 QIG74990.1 ribonucleoside-diphosphate reductase protein [Rhizobium phage RHph_I65] diamond 372 96.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Rhizobium phage RHph_I65

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;