RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA664479" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA664479 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7007779 7007779 PRJNA664479_S_NODE_13426_length_170_cov_1.892562_g13350_i0 PRJNA664479 13426 170 1.892562 3.2173554 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 52.8 0.014   NTclustered gi|2519014114|ref|XM_057458451.1| 13093 g13350 i0 100 0.329411764705882 28 0 16 0 121 148 263 290 PREDICTED: Hydractinia symbiolongicarpus ATP-dependent DNA helicase DDX11-like (LOC130655672), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
26808879 26808879 PRJNA664479_S_NODE_4561_length_246_cov_0.888325_g4485_i0 PRJNA664479 4561 246 0.888325 2.1852795 Metazoa 33208 Cnidaria other_Eukaryota 49.3 1.73e-4   NR XP_031556465.1 6105 g4485 i0 39.5 44.4512195121951 81 49 98.8 0 244 2 202 282 XP_031556465.1 26S proteasome non-ATPase regulatory subunit 14 [Actinia tenebrosa] diamond 10935 49.7 0.991951710261569 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
26998533 26998533 PRJNA664479_S_NODE_9762_length_189_cov_2.378571_g9686_i0 PRJNA664479 9762 189 2.378571 4.49549919 Malacalcyonacea 3028843 Cnidaria other_Eukaryota 62.8 1.54e-9   NR XP_028406517.1 151771 g9686 i0 50 40.5079365079365 58 29 92.1 0 2 175 436 493 XP_028406517.1 myosin heavy chain, striated muscle-like [Dendronephthya gigantea] diamond 7656 63.2 0.993670886075949 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
27523830 27523830 PRJNA664479_S_NODE_4603_length_245_cov_0.994898_g4527_i0 PRJNA664479 4603 245 0.994898 2.4375001 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 44.3 0.00263   NR RMX56225.1 46731 g4527 i0 58.1 1.44489795918367 43 18 52.7 0 1 129 64 106 RMX56225.1 hypothetical protein pdam_00018243 [Pocillopora damicornis] diamond 354 44.7 0.991051454138702 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
27757240 27757240 PRJNA664479_S_NODE_14084_length_168_cov_0.840336_g14008_i0 PRJNA664479 14084 168 0.840336 1.41176448 Actiniaria 6103 Cnidaria other_Eukaryota 42.7 0.0129   NR EDO33547.1 45351 g14008 i0 58.2 3.80357142857143 55 23 98.2 0 166 2 14 68 EDO33547.1 predicted protein [Nematostella vectensis] diamond 639 43.1 0.990719257540603 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
30555209 30555209 PRJNA664479_S_NODE_12173_length_176_cov_1.188976_g12097_i0 PRJNA664479 12173 176 1.188976 2.09259776 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 60.8 6.17e-9   NR KAK3745813.1 3060491 g12097 i0 55.4 15.2727272727273 56 25 95.5 0 2 169 910 965 KAK3745813.1 hypothetical protein QZH41_005676 [Actinostola sp. cb2023] diamond 2688 60.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023
32717253 32717253 PRJNA664479_S_NODE_7220_length_209_cov_0.756250_g7144_i0 PRJNA664479 7220 209 0.75625 1.5805625 Hydrozoa 6074 Cnidaria other_Eukaryota 70.9 1.4e-12   NR XP_065676487.1 6087 g7144 i0 68 104.066985645933 50 16 71.8 0 208 59 134 183 XP_065676487.1 eukaryotic translation initiation factor 2 subunit 2 isoform X3 [Hydra vulgaris] diamond 21750 71.2 0.995786516853933 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;