RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA664479", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA664479 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27018173 27018173 PRJNA664479_S_NODE_7982_length_202_cov_1.000000_g7906_i0 PRJNA664479 7982 202 1 2.02 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 50.4 4.17e-5   NR CAF1176848.1 1234261 g7906 i0 43.3 1.99009900990099 67 38 99.5 0 202 2 275 341 CAF1176848.1 unnamed protein product [Didymodactylos carnosus] diamond 402 50.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
27902529 27902529 PRJNA664479_S_NODE_1845_length_360_cov_4.836013_g1769_i0 PRJNA664479 1845 360 4.836013 17.4096468 Brachionus plicatilis 10195 Rotifera other_Eukaryota 77.4 9.84e-16   NR RNA22472.1 10195 g1769 i0 56.2 1.29166666666667 73 32 60.8 0 122 340 1 73 RNA22472.1 heterogeneous nuclear ribonucleo D0 [Brachionus plicatilis] diamond 465 77.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;