RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA664479", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA664479 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27251633 27251633 PRJNA664479_S_NODE_17563_length_163_cov_0.877193_g17487_i0 PRJNA664479 17563 163 0.877193 1.42982459 root 1 Root_unresolved Root_unresolved 82.4 1.32e-16   NR XP_065836236.1 121494 g17487 i0 72.2 34.7852760736196 54 15 99.4 0 162 1 524 577 XP_065836236.1 elongation factor 2b-like [Oscarella lobularis] diamond 5670 83.2 0.990384615384615 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
31946246 31946246 PRJNA664479_S_NODE_5957_length_223_cov_1.028736_g5881_i0 PRJNA664479 5957 223 1.028736 2.29408128 Geodia barretti 519541 Porifera other_Eukaryota 42.4 0.0378   NR CAI8018902.1 519541 g5881 i0 46.4 0.928251121076233 69 37 92.8 0 207 1 179 247 CAI8018902.1 Actin, nonmuscle [Geodia barretti] diamond 207 42.4 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tetractinellida Geodiidae Geodia Geodia barretti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;