RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA664479", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA664479 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28313268 28313268 PRJNA664479_S_NODE_8826_length_196_cov_0.795918_g8750_i0 PRJNA664479 8826 196 0.795918 1.55999928 Gigaspora rosea 44941 Fungi Fungi 75.5 2.94e-14   NR AAB97775.1 44941 g8750 i0 71.9 22.2244897959184 64 17 96.4 1 195 7 147 210 AAB97775.1 glycerine aldehyde phosphate dehydrogenase, partial [Gigaspora rosea] diamond 4356 75.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora rosea
31883042 31883042 PRJNA664479_S_NODE_11757_length_178_cov_1.558140_g11681_i0 PRJNA664479 11757 178 1.55814 2.7734892 Podila humilis 64523 Fungi Fungi 52 1.01e-6   NR KAI9236711.1 64523 g11681 i0 56.1 0.960674157303371 57 22 91 1 4 165 17 73 KAI9236711.1 MAG: hypothetical protein BYD32DRAFT_369445, partial [Podila humilis] diamond 171 52 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Podila Podila humilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;