RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA664479", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA664479 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12641471 12641471 PRJNA664479_S_NODE_15050_length_166_cov_0.871795_g14974_i0 PRJNA664479 15050 166 0.871795 1.4471797 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 178 2.2e-40   NTclustered gi|2301269116|ref|NC_066077.1| 197753 g14974 i0 87.179 33.2289156626506 156 20 94 0 3 158 151744 151589 Pleurosigma intermedium isolate Jiaozhou Bay in China chloroplast, complete genome blastn 5516 178 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Pleurosigmataceae Pleurosigma Pleurosigma intermedium
31440221 31440221 PRJNA664479_S_NODE_5936_length_223_cov_1.580460_g5860_i0 PRJNA664479 5936 223 1.58046 3.5244258 Discostella pseudostelligera 259834 SAR_Eukaryotes SAR_Eukaryotes 52.8 2.42e-6   NR KAL3762553.1 259834 g5860 i0 40.3 0.968609865470852 72 43 96.9 0 4 219 58 129 KAL3762553.1 hypothetical protein ACHAWU_002425 [Discostella pseudostelligera] diamond 216 52.8 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Discostella Discostella pseudostelligera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;