RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA664479", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA664479 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4457077 4457077 PRJNA664479_S_NODE_17444_length_163_cov_0.894737_g17368_i0 PRJNA664479 17444 163 0.894737 1.45842131 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 58.4 2.92e-4   NTclustered gi|916502996|ref|XM_013496795.1| 44415 g17368 i0 97.059 1.13496932515337 34 1 21 0 1 34 1798 1831 Eimeria mitis phosphoserine phosphatase, putative (EMH_0004480), partial mRNA blastn 185 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
19756080 19756080 PRJNA664479_S_NODE_4696_length_243_cov_1.634021_g4620_i0 PRJNA664479 4696 243 1.634021 3.97067103 Plasmodium inui 52288 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|672184987|ref|XM_008815718.1| 1237626 g4620 i0 96.875 0.131687242798354 32 0 13 1 125 155 8920 8951 Plasmodium inui San Antonio 1 hypothetical protein partial mRNA blastn 32 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium inui
31693332 31693332 PRJNA664479_S_NODE_13537_length_170_cov_1.008264_g13461_i0 PRJNA664479 13537 170 1.008264 1.7140488 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 56.6 1.77e-7   NR XP_067715666.1 5871 g13461 i0 54.5 4.74705882352941 55 25 97.1 0 5 169 809 863 XP_067715666.1 NAD-specific glutamate dehydrogenase [Babesia caballi] diamond 807 56.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;