RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA663960" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA663960 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26669674 26669674 PRJNA663960_S_NODE_47421_length_176_cov_1.581395_g47185_i0 PRJNA663960 47421 176 1.581395 2.7832552 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 41.6 0.0346   NR HLY19231.1 2212468 g47185 i0 48.6 0.630681818181818 37 19 63.1 0 160 50 52 88 HLY19231.1 gluconate 2-dehydrogenase subunit 3 family protein [Bryobacteraceae bacterium] diamond 111 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30366204 30366204 PRJNA663960_S_NODE_11232_length_323_cov_1.478261_g10996_i0 PRJNA663960 11232 323 1.478261 4.77478303 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 45.4 0.0105   NR HWF83505.1 2910147 g10996 i0 42.6 0.56656346749226 61 33 54.8 1 106 282 476 536 HWF83505.1 alkaline phosphatase family protein [Vicinamibacterales bacterium] diamond 183 45.4 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;