RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA663960" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 7 ✖

bioproject 1

  • PRJNA663960 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1904892 1904892 PRJNA663960_S_NODE_4182_length_437_cov_4.892308_g3947_i0 PRJNA663960 4182 437 4.892308 21.37938596 Parvovirus macaca3116 3117124 Viruses Viruses 56.5 0.003   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g3947 i0 100 0.551487414187643 30 0 7 0 406 435 30 1 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 241 56.5 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116
4456655 4456655 PRJNA663960_S_NODE_35384_length_204_cov_3.248408_g35148_i0 PRJNA663960 35384 204 3.248408 6.62675232 Erythroparvovirus ungulate1 3052194 Viruses Viruses 372 1.2e-98   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g35148 i0 99.51 6 204 1 100 0 1 204 3560 3763 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 1224 372 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
7539924 7539924 PRJNA663960_S_NODE_16086_length_288_cov_1.925311_g15850_i0 PRJNA663960 16086 288 1.925311 5.54489568 Copiparvovirus 1511888 Viruses Viruses 483 7.969999999999997e-132   NTclustered gi|1725344901|ref|NC_031959.2| 1917013 g15850 i0 98.889 4.20486111111111 270 3 94 0 1 270 5320 5051 Bosavirus MS-2016a, complete genome blastn 1211 483 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate5
8815147 8815147 PRJNA663960_S_NODE_60227_length_159_cov_1.633929_g59991_i0 PRJNA663960 60227 159 1.633929 2.59794711 Copiparvovirus 1511888 Viruses Viruses 294 1.98e-75   NTclustered gi|1725344901|ref|NC_031959.2| 1917013 g59991 i0 100 4 159 0 100 0 1 159 2596 2438 Bosavirus MS-2016a, complete genome blastn 636 294 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate5
9557123 9557123 PRJNA663960_S_NODE_19708_length_267_cov_1.418182_g19472_i0 PRJNA663960 19708 267 1.418182 3.78654594 Erythroparvovirus ungulate1 3052194 Viruses Viruses 488 1.5699999999999998e-133   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g19472 i0 99.625 8.73782771535581 267 1 100 0 1 267 2282 2016 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 2333 488 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
12108044 12108044 PRJNA663960_S_NODE_29770_length_222_cov_3.160000_g29534_i0 PRJNA663960 29770 222 3.16 7.0152 Erythroparvovirus ungulate1 3052194 Viruses Viruses 401 1.6999999999999994e-107   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g29534 i0 99.545 9.09009009009009 220 1 99 0 3 222 2361 2580 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 2018 401 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
13382787 13382787 PRJNA663960_S_NODE_36291_length_202_cov_1.316129_g36055_i0 PRJNA663960 36291 202 1.316129 2.65858058 Parvovirus macaca3116 3117124 Viruses Viruses 54.7 0.005   NTclustered gi|2710391813|tpg|BK066549.1| 3117124 g36055 i0 100 1.14851485148515 29 0 14 0 3 31 1 29 MAG TPA_asm: Parvovirus macaca3116 isolate Parvo3116 genomic sequence blastn 232 54.7 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus macaca3116

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;