RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA663960" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA663960 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3713813 3713813 PRJNA663960_S_NODE_43_length_2151_cov_43.415399_g19_i1 PRJNA663960 43 2151 43.415399 933.86523249 Moloney murine leukemia virus 11801 Viruses Viruses 1295 0   NR NP_057933.2 11801 g19 i1 97.6 2.76569037656904 659 16 91.9 0 2070 94 677 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 5949 1295 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
13916049 13916049 PRJNA663960_S_NODE_31_length_2381_cov_39.373608_g19_i0 PRJNA663960 31 2381 39.373608 937.48560648 Moloney murine leukemia virus 11801 Viruses Viruses 1295 0   NR NP_057933.2 11801 g19 i0 97.6 2.49097018059639 659 16 83 0 2300 324 677 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 5931 1295 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;