RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA663960", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA663960 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15931650 15931650 PRJNA663960_S_NODE_38573_length_196_cov_1.637584_g38337_i0 PRJNA663960 38573 196 1.637584 3.20966464 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g38337 i0 100 0.290816326530612 29 0 15 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
21031175 21031175 PRJNA663960_S_NODE_24077_length_245_cov_3.898990_g23841_i0 PRJNA663960 24077 245 3.89899 9.5525255 Hebei partiti-like virus 4 3371278 Viruses Viruses 204 5.77e-48   NTclustered gi|2819074956|gb|PQ150577.1| 3371278 g23841 i0 82.5 0.979591836734694 240 34 96 8 10 245 438 203 MAG: Hebei partiti-like virus 4 isolate Hebei_128 segment RNA1, partial sequence blastn 240 204 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Hebei partiti-like virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;