RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA663960", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA663960 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13382679 13382679 PRJNA663960_S_NODE_21031_length_260_cov_1.755869_g20795_i0 PRJNA663960 21031 260 1.755869 4.5652594 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 324 4.55e-84   NTclustered gi|1624698154|ref|XM_029013945.1| 189622 g20795 i0 91.286 20.2346153846154 241 15 100 5 1 239 66 302 Babesia ovata vWA domain-like family protein, putative (BOVATA_050280), partial mRNA blastn 5261 324 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
29134314 29134314 PRJNA663960_S_NODE_16369_length_286_cov_3.000000_g16133_i0 PRJNA663960 16369 286 3 8.58 Plasmodium vivax 5855 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00369   NR CAA67111.1 5855 g16133 i0 49.1 0.576923076923077 55 27 57.7 1 1 165 44 97 CAA67111.1 PV14 [Plasmodium vivax] diamond 165 44.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;