contig_metadata
6 rows where bioproject = "PRJNA663960" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19755780 | 19755780 | PRJNA663960_S_NODE_51276_length_169_cov_1.565574_g51040_i0 | PRJNA663960 | 51276 | 169 | 1.565574 | 2.64582006 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 285 | 1.28e-72 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g51040 | i0 | 97.041 | 109.680473372781 | 169 | 5 | 100 | 0 | 1 | 169 | 3557345 | 3557513 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 18536 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 21031416 | 21031416 | PRJNA663960_S_NODE_59817_length_160_cov_0.902655_g59581_i0 | PRJNA663960 | 59817 | 160 | 0.902655 | 1.444248 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 289 | 9.29e-74 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g59581 | i0 | 99.371 | 111.68125 | 159 | 1 | 99 | 0 | 2 | 160 | 3557675 | 3557517 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 17869 | 289 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 22305993 | 22305993 | PRJNA663960_S_NODE_27218_length_232_cov_1.929730_g26982_i0 | PRJNA663960 | 27218 | 232 | 1.92973 | 4.4769736 | Sedimentisphaera cyanobacteriorum | 1940790 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|1146072971|gb|CP019633.1| | 1940790 | g26982 | i0 | 100 | 0.120689655172414 | 28 | 0 | 12 | 0 | 66 | 93 | 1410998 | 1411025 | Sedimentisphaera cyanobacteriorum strain L21-RPul-D3 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaeraceae | Sedimentisphaera | Sedimentisphaera cyanobacteriorum | |
| 28609492 | 28609492 | PRJNA663960_S_NODE_12507_length_312_cov_5.286792_g12271_i0 | PRJNA663960 | 12507 | 312 | 5.286792 | 16.49479104 | Cerasicoccaceae | 3056374 | Bacteria | Bacteria | 44.3 | 0.0225 | NR | WP_220622161.1 | 2866311 | g12271 | i0 | 47.6 | 1.23076923076923 | 42 | 21 | 39.4 | 1 | 232 | 110 | 111 | 152 | WP_220622161.1 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein [Ruficoccus sp. ZRK36] | diamond | 384 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Ruficoccus | Ruficoccus sp. ZRK36 | |
| 29165887 | 29165887 | PRJNA663960_S_NODE_17989_length_276_cov_3.340611_g17753_i0 | PRJNA663960 | 17989 | 276 | 3.340611 | 9.22008636 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 43.1 | 0.0412 | NR | MFM8289687.1 | 2026779 | g17753 | i0 | 43.1 | 0.630434782608696 | 58 | 30 | 60.9 | 3 | 180 | 13 | 463 | 519 | MFM8289687.1 ArnT family glycosyltransferase [Planctomycetaceae bacterium] | diamond | 174 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 30176132 | 30176132 | PRJNA663960_S_NODE_56552_length_163_cov_0.879310_g56316_i0 | PRJNA663960 | 56552 | 163 | 0.87931 | 1.4332753 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 40 | 0.0399 | NR | MBO5724931.1 | 2053569 | g56316 | i0 | 32.7 | 0.901840490797546 | 49 | 33 | 90.2 | 0 | 10 | 156 | 11 | 59 | MBO5724931.1 hypothetical protein [Lentisphaeria bacterium] | diamond | 147 | 40 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;