RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA662254" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA662254 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17739874 17739874 PRJNA662254_P_NODE_64394_length_241_cov_0.916667_g63743_i0 PRJNA662254 64394 241 0.916667 2.20916747 Pseudomonadati 3379134 Bacteria Bacteria 76.6 6e-15   NR MFO1491128.1 2212473 g63743 i0 63.6 4.10788381742739 55 20 68.5 0 38 202 20 74 MFO1491128.1 thrombospondin type 3 repeat-containing protein [Kiritimatiellia bacterium] diamond 990 76.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27776578 27776578 PRJNA662254_P_NODE_61704_length_243_cov_0.905882_g61053_i0 PRJNA662254 61704 243 0.905882 2.20129326 Kiritimatiellales bacterium 2202731 Bacteria Bacteria 103 1.1099999999999999e-23   NR MCF7816692.1 2202731 g61053 i0 66.7 1 81 27 100 0 1 243 504 584 MCF7816692.1 LamG domain-containing protein [Kiritimatiellales bacterium] diamond 243 103 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales     Kiritimatiellales bacterium
29860241 29860241 PRJNA662254_P_NODE_44991_length_251_cov_0.865169_g44340_i0 PRJNA662254 44991 251 0.865169 2.17157419 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 52.4 4.94e-6   NR MBN1671203.1 2212473 g44340 i0 37.8 0.884462151394422 74 43 88.4 2 24 245 60 130 MBN1671203.1 DUF2190 family protein [Kiritimatiellia bacterium] diamond 222 52.4 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30112938 30112938 PRJNA662254_P_NODE_55732_length_246_cov_0.890173_g55081_i0 PRJNA662254 55732 246 0.890173 2.18982558 Kiritimatiellales bacterium 2202731 Bacteria Bacteria 63.2 2.44e-9   NR MCF7817005.1 2202731 g55081 i0 63.5 1.26829268292683 52 19 63.4 0 156 1 1 52 MCF7817005.1 Gfo/Idh/MocA family oxidoreductase [Kiritimatiellales bacterium] diamond 312 63.2 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales     Kiritimatiellales bacterium
30618481 30618481 PRJNA662254_P_NODE_61713_length_243_cov_0.905882_g61062_i0 PRJNA662254 61713 243 0.905882 2.20129326 Kiritimatiellota bacterium 2599938 Bacteria Bacteria 117 2.0099999999999999e-28   NR MCX7008814.1 2599938 g61062 i0 70 0.987654320987654 80 24 98.8 0 243 4 215 294 MCX7008814.1 DUF5703 domain-containing protein [Kiritimatiellota bacterium] diamond 240 117 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellota bacterium
31029556 31029556 PRJNA662254_P_NODE_65595_length_241_cov_0.916667_g64944_i0 PRJNA662254 65595 241 0.916667 2.20916747 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 69.7 1.89e-13   NR MDD5705109.1 2212473 g64944 i0 45.9 0.921161825726141 74 40 92.1 0 226 5 1 74 MDD5705109.1 hypothetical protein [Kiritimatiellia bacterium] diamond 222 69.7 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32641842 32641842 PRJNA662254_P_NODE_57800_length_245_cov_0.895349_g57149_i0 PRJNA662254 57800 245 0.895349 2.19360505 Kiritimatiellota bacterium 2599938 Bacteria Bacteria 100 2.0799999999999994e-23   NR MCX7006656.1 2599938 g57149 i0 67.7 0.759183673469388 62 20 75.9 0 244 59 222 283 MCX7006656.1 hypothetical protein [Kiritimatiellota bacterium] diamond 186 100 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;