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contig_metadata

26 rows where bioproject = "PRJNA662254" and tax_phylum = "Fibrobacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 26 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA662254 · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1904370 1904370 PRJNA662254_P_NODE_25342_length_328_cov_1.207843_g24691_i0 PRJNA662254 25342 328 1.207843 3.96172504 Fibrobacteria bacterium 2725311 Bacteria Bacteria 159 1.1899999999999997e-42   NR HXP90250.1 2725311 g24691 i0 96.4 0.759146341463415 83 3 75.9 0 326 78 701 783 HXP90250.1 ATP-binding protein [Fibrobacteria bacterium] diamond 249 159 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
1904456 1904456 PRJNA662254_P_NODE_51322_length_248_cov_0.880000_g50671_i0 PRJNA662254 51322 248 0.88 2.1824 Fibrobacteria bacterium 2725311 Bacteria Bacteria 170 8.68e-50   NR HXP91452.1 2725311 g50671 i0 95.1 0.991935483870968 82 4 99.2 0 248 3 201 282 HXP91452.1 cyclopropane fatty acyl phospholipid synthase [Fibrobacteria bacterium] diamond 246 170 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
10832538 10832538 PRJNA662254_P_NODE_61869_length_243_cov_0.905882_g61218_i0 PRJNA662254 61869 243 0.905882 2.20129326 Fibrobacteria bacterium 2725311 Bacteria Bacteria 164 1.67e-49   NR HXP90696.1 2725311 g61218 i0 100 0.987654320987654 80 0 98.8 0 3 242 53 132 HXP90696.1 DUF4914 family protein [Fibrobacteria bacterium] diamond 240 164 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
12107683 12107683 PRJNA662254_P_NODE_49090_length_249_cov_0.875000_g48439_i0 PRJNA662254 49090 249 0.875 2.17875 Fibrobacterota bacterium 2052160 Bacteria Bacteria 230 9.699999999999995e-56   NTclustered gi|1958056460|gb|CP064986.1| 2052160 g48439 i0 83.951 10.4939759036145 243 35 97 4 1 241 5130323 5130563 Fibrobacteres bacterium isolate Fred_18-Q3-R57-64_MAXAC.109_cln chromosome, complete genome blastn 2613 230 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
22305571 22305571 PRJNA662254_P_NODE_40838_length_263_cov_0.957895_g40187_i0 PRJNA662254 40838 263 0.957895 2.51926385 Fibrobacteria bacterium 2725311 Bacteria Bacteria 129 5.38e-33   NR HXP91441.1 2725311 g40187 i0 81.6 0.992395437262357 87 16 99.2 0 261 1 61 147 HXP91441.1 ATP-binding protein [Fibrobacteria bacterium] diamond 261 129 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
26618775 26618775 PRJNA662254_P_NODE_52841_length_247_cov_0.885057_g52190_i0 PRJNA662254 52841 247 0.885057 2.18609079 Chitinispirillum 1860139 Bacteria Bacteria 112 6.07e-30   NR KMQ52908.1 1008392 g52190 i0 67.9 3.97165991902834 81 26 98.4 0 2 244 7 87 KMQ52908.1 30S ribosomal protein S6p [Chitinispirillum alkaliphilum] diamond 981 113 0.991150442477876 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae Chitinispirillum Chitinispirillum alkaliphilum
26923298 26923298 PRJNA662254_P_NODE_56982_length_245_cov_0.895349_g56331_i0 PRJNA662254 56982 245 0.895349 2.19360505 Fibrobacteria bacterium 2725311 Bacteria Bacteria 151 4.43e-43   NR HXP90109.1 2725311 g56331 i0 97.5 0.991836734693878 81 2 99.2 0 245 3 66 146 HXP90109.1 MlaD family protein [Fibrobacteria bacterium] diamond 243 151 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
27018140 27018140 PRJNA662254_P_NODE_55142_length_246_cov_0.890173_g54491_i0 PRJNA662254 55142 246 0.890173 2.18982558 Fibrobacterota bacterium 2052160 Bacteria Bacteria 125 1.11e-32   NR HAP00186.1 2052160 g54491 i0 64.6 1 82 28 98.8 1 2 244 94 175 HAP00186.1 hypothetical protein [Fibrobacterota bacterium] diamond 246 125 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
27397674 27397674 PRJNA662254_P_NODE_56063_length_246_cov_0.890173_g55412_i0 PRJNA662254 56063 246 0.890173 2.18982558 Fibrobacteria bacterium 2725311 Bacteria Bacteria 144 6.03e-40   NR HXP90859.1 2725311 g55412 i0 89.7 0.951219512195122 78 8 95.1 0 13 246 1 78 HXP90859.1 LacI family DNA-binding transcriptional regulator [Fibrobacteria bacterium] diamond 234 144 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
27523799 27523799 PRJNA662254_P_NODE_56823_length_245_cov_0.895349_g56172_i0 PRJNA662254 56823 245 0.895349 2.19360505 Fibrobacteria bacterium 2725311 Bacteria Bacteria 173 1.39e-50   NR HXP91785.1 2725311 g56172 i0 93.8 1.98367346938776 81 5 99.2 0 244 2 275 355 HXP91785.1 hypothetical protein [Fibrobacteria bacterium] diamond 486 173 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
27776580 27776580 PRJNA662254_P_NODE_62804_length_242_cov_0.911243_g62153_i0 PRJNA662254 62804 242 0.911243 2.20520806 Fibrobacteria bacterium 2725311 Bacteria Bacteria 133 3.95e-34   NR HXP90603.1 2725311 g62153 i0 86.3 0.991735537190083 80 11 99.2 0 2 241 184 263 HXP90603.1 ComEC/Rec2 family competence protein [Fibrobacteria bacterium] diamond 240 133 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
28407911 28407911 PRJNA662254_P_NODE_38566_length_270_cov_1.517766_g37915_i0 PRJNA662254 38566 270 1.517766 4.0979682 Fibrobacterota bacterium 2052160 Bacteria Bacteria 90.5 2.37e-19   NR MBK9580113.1 2052160 g37915 i0 58.9 0.811111111111111 73 30 81.1 0 267 49 244 316 MBK9580113.1 IS110 family transposase [Fibrobacterota bacterium] diamond 219 90.5 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
28597427 28597427 PRJNA662254_P_NODE_45627_length_251_cov_0.865169_g44976_i0 PRJNA662254 45627 251 0.865169 2.17157419 Fibrobacteria bacterium 2725311 Bacteria Bacteria 132 1.23e-33   NR HXP90506.1 2725311 g44976 i0 96.4 0.99203187250996006 83 3 99.2 0 251 3 886 968 HXP90506.1 tetratricopeptide repeat protein [Fibrobacteria bacterium] diamond 249 132 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
28723655 28723655 PRJNA662254_P_NODE_57767_length_245_cov_0.895349_g57116_i0 PRJNA662254 57767 245 0.895349 2.19360505 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 146 5.68e-41   NR HON12064.1 2813024 g57116 i0 88.9 1.98367346938776 81 9 99.2 0 2 244 226 306 HON12064.1 cysteine synthase A [Chitinispirillaceae bacterium] diamond 486 146 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium
28786561 28786561 PRJNA662254_P_NODE_56347_length_246_cov_0.884393_g55696_i0 PRJNA662254 56347 246 0.884393 2.17560678 Fibrobacteria bacterium 2725311 Bacteria Bacteria 103 1.47e-26   NR HKP95435.1 2725311 g55696 i0 54.9 1 82 37 100 0 1 246 4 85 HKP95435.1 hypothetical protein [Fibrobacteria bacterium] diamond 246 103 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
28976315 28976315 PRJNA662254_P_NODE_51488_length_248_cov_0.880000_g50837_i0 PRJNA662254 51488 248 0.88 2.1824 Fibrobacteria bacterium 2725311 Bacteria Bacteria 159 2.2e-43   NR HXP91529.1 2725311 g50837 i0 97.6 0.991935483870968 82 2 99.2 0 248 3 382 463 HXP91529.1 outer membrane protein assembly factor BamA [Fibrobacteria bacterium] diamond 246 159 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
30018410 30018410 PRJNA662254_P_NODE_60631_length_243_cov_0.905882_g59980_i0 PRJNA662254 60631 243 0.905882 2.20129326 Chitinispirillaceae bacterium 2813024 Bacteria Bacteria 93.2 7.94e-21   NR MBN1129298.1 2813024 g59980 i0 66.1 1.75308641975309 62 21 76.5 0 238 53 135 196 MBN1129298.1 T9SS type A sorting domain-containing protein [Chitinispirillaceae bacterium] diamond 426 93.2 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinispirillia Chitinispirillales Chitinispirillaceae   Chitinispirillaceae bacterium
30239401 30239401 PRJNA662254_P_NODE_45452_length_251_cov_0.865169_g44801_i0 PRJNA662254 45452 251 0.865169 2.17157419 Fibrobacterota bacterium 2052160 Bacteria Bacteria 144 7.85e-38   NR MBK8801926.1 2052160 g44801 i0 72.3 1.9840637450199201 83 23 99.2 0 2 250 647 729 MBK8801926.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Fibrobacterota bacterium] diamond 498 144 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
30271293 30271293 PRJNA662254_P_NODE_60812_length_243_cov_0.905882_g60161_i0 PRJNA662254 60812 243 0.905882 2.20129326 Fibrobacteria bacterium 2725311 Bacteria Bacteria 134 4.74e-35   NR HXP89629.1 2725311 g60161 i0 80 0.987654320987654 80 16 98.8 0 2 241 136 215 HXP89629.1 S8 family serine peptidase [Fibrobacteria bacterium] diamond 240 134 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
30586809 30586809 PRJNA662254_P_NODE_61333_length_243_cov_0.905882_g60682_i0 PRJNA662254 61333 243 0.905882 2.20129326 Fibrobacteria bacterium 2725311 Bacteria Bacteria 106 5.460000000000001e-26   NR HXP89370.1 2725311 g60682 i0 94.1 0.62962962962963 51 3 63 0 153 1 1 51 HXP89370.1 rhomboid family intramembrane serine protease [Fibrobacteria bacterium] diamond 153 106 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
31313755 31313755 PRJNA662254_P_NODE_54115_length_247_cov_0.885057_g53464_i0 PRJNA662254 54115 247 0.885057 2.18609079 Fibrobacterota bacterium 2052160 Bacteria Bacteria 155 5.53e-47   NR MBK9580077.1 2052160 g53464 i0 88.9 0.983805668016194 81 9 98.4 0 245 3 40 120 MBK9580077.1 hypothetical protein [Fibrobacterota bacterium] diamond 243 155 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
31484323 31484323 PRJNA662254_P_NODE_49676_length_249_cov_0.875000_g49025_i0 PRJNA662254 49676 249 0.875 2.17875 Pseudomonadati 3379134 Bacteria Bacteria 134 9.06e-38   NR NLD93959.1 35828 g49025 i0 75.3 9.74698795180723 81 20 97.6 0 5 247 43 123 NLD93959.1 cysteine hydrolase [Fibrobacter sp.] diamond 2427 135 0.992592592592593 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
31503709 31503709 PRJNA662254_P_NODE_54836_length_246_cov_0.890173_g54185_i0 PRJNA662254 54836 246 0.890173 2.18982558 Fibrobacteria bacterium 2725311 Bacteria Bacteria 152 1.47e-41   NR HXP90895.1 2725311 g54185 i0 95.1 0.98780487804878 81 4 98.8 0 2 244 324 404 HXP90895.1 type VI secretion system protein TssA [Fibrobacteria bacterium] diamond 243 152 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32072975 32072975 PRJNA662254_P_NODE_55478_length_246_cov_0.890173_g54827_i0 PRJNA662254 55478 246 0.890173 2.18982558 Chitinivibrionales bacterium 2663014 Bacteria Bacteria 142 2.77e-38   NR HMD67274.1 2663014 g54827 i0 84 0.98780487804878 81 13 98.8 0 245 3 353 433 HMD67274.1 arginine--tRNA ligase [Chitinivibrionales bacterium] diamond 243 142 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinivibrionia Chitinivibrionales     Chitinivibrionales bacterium
32136300 32136300 PRJNA662254_P_NODE_15358_length_419_cov_1.335260_g14707_i0 PRJNA662254 15358 419 1.33526 5.5947394 Fibrobacterota bacterium 2052160 Bacteria Bacteria 90.9 3.93e-18   NR QQS03139.1 2052160 g14707 i0 36.2 0.988066825775656 138 86 97.4 1 6 413 569 706 QQS03139.1 MAG: hypothetical protein IPK50_12550 [Fibrobacterota bacterium] diamond 414 90.9 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
32893875 32893875 PRJNA662254_P_NODE_61020_length_243_cov_0.905882_g60369_i0 PRJNA662254 61020 243 0.905882 2.20129326 Fibrobacteria bacterium 2725311 Bacteria Bacteria 147 1.44e-42   NR HXP91678.1 2725311 g60369 i0 86.4 1 81 11 100 0 243 1 52 132 HXP91678.1 metallophosphoesterase [Fibrobacteria bacterium] diamond 243 147 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;