RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA662254" and tax_phylum = "Candidatus Zixiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA662254 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26606372 26606372 PRJNA662254_P_NODE_18221_length_384_cov_0.974277_g17570_i0 PRJNA662254 18221 384 0.974277 3.74122368 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 52.8 5.99e-5   NR MCP4584188.1 2053527 g17570 i0 53.3 0.703125 45 21 35.2 0 4 138 1198 1242 MCP4584188.1 hypothetical protein [Candidatus Zixiibacteriota bacterium] diamond 270 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
32484436 32484436 PRJNA662254_P_NODE_55599_length_246_cov_0.890173_g54948_i0 PRJNA662254 55599 246 0.890173 2.18982558 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 119 2.74e-31   NR HVP64889.1 2053527 g54948 i0 75.6 2 82 20 100 0 246 1 85 166 HVP64889.1 sigma 54-interacting transcriptional regulator [Candidatus Zixiibacteriota bacterium] diamond 492 119 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;