RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA662254", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA662254 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20288252 20288252 PRJNA662254_P_NODE_16_length_6342_cov_26.177062_g14_i0 PRJNA662254 16 6342 26.177062 1660.14927204 root 1 Root_unresolved Root_unresolved 11372 0   NTclustered gi|388240149|emb|HE818416.1| 12242 g14 i0 99.038 99.7921791233049 6342 60 100 1 1 6342 20 6360 Tobacco mosaic virus isolate Fumeng, complete genome blastn 632882 11372 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
29291894 29291894 PRJNA662254_P_NODE_25189_length_329_cov_1.203125_g24538_i0 PRJNA662254 25189 329 1.203125 3.95828125 Tolivirales sp. 2809914 Viruses Viruses 127 1.4799999999999998e-31   NR WRQ65483.1 2809914 g24538 i0 62.5 1.92401215805471 104 39 94.8 0 327 16 373 476 WRQ65483.1 hypothetical protein [Tolivirales sp.] diamond 633 127 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;