RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA662254", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA662254 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8281581 8281581 PRJNA662254_P_NODE_59727_length_244_cov_0.900585_g59076_i0 PRJNA662254 59727 244 0.900585 2.1974274 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.022   NTclustered gi|2794959160|ref|XM_067863523.1| 2049356 g59076 i0 86 0.204918032786885 50 6 20 1 181 230 258 210 Monocercomonoides exilis uncharacterized protein (MONOS_11026), partial mRNA blastn 50 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
28439563 28439563 PRJNA662254_P_NODE_47066_length_250_cov_0.870056_g46415_i0 PRJNA662254 47066 250 0.870056 2.17514 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 97.1 2.3400000000000003e-21   NR KAJ4455108.1 342808 g46415 i0 71.6 7.476 67 19 80.4 0 1 201 399 465 KAJ4455108.1 putative V-type proton ATPase subunit B2 [Paratrimastix pyriformis] diamond 1869 97.1 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29165868 29165868 PRJNA662254_P_NODE_56609_length_245_cov_1.337209_g55958_i0 PRJNA662254 56609 245 1.337209 3.27616205 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 61.2 8.49e-9   NR KAJ4463127.1 342808 g55958 i0 41.7 0.881632653061225 72 42 88.2 0 231 16 15 86 KAJ4463127.1 putative defective in Cullin neddylation protein 1 [Paratrimastix pyriformis] diamond 216 61.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;