RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA662254", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA662254 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27555167 27555167 PRJNA662254_P_NODE_50084_length_249_cov_0.875000_g49433_i0 PRJNA662254 50084 249 0.875 2.17875 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 60.1 2.73e-8   NR HWF44074.1 2447898 g49433 i0 58.3 1 48 20 57.8 0 17 160 7 54 HWF44074.1 ferrochelatase [Candidatus Kapaibacterium sp.] diamond 249 60.1 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30207534 30207534 PRJNA662254_P_NODE_64032_length_242_cov_0.881657_g63381_i0 PRJNA662254 64032 242 0.881657 2.13360994 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 132 9.61e-37   NR HEY3875027.1 2447898 g63381 i0 79.3 2.97520661157025 82 12 97.9 2 1 237 6 85 HEY3875027.1 phytanoyl-CoA dioxygenase family protein [Candidatus Kapaibacterium sp.] diamond 720 132 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30902999 30902999 PRJNA662254_P_NODE_59214_length_244_cov_0.900585_g58563_i0 PRJNA662254 59214 244 0.900585 2.1974274 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 119 2.63e-31   NR HWF44233.1 2447898 g58563 i0 72.7 0.94672131147541 77 21 94.7 0 9 239 63 139 HWF44233.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Kapaibacterium sp.] diamond 231 119 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31503711 31503711 PRJNA662254_P_NODE_55356_length_246_cov_0.890173_g54705_i0 PRJNA662254 55356 246 0.890173 2.18982558 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 83.2 2.01e-16   NR MCX6152881.1 2447898 g54705 i0 46.9 0.98780487804878 81 43 98.8 0 3 245 171 251 MCX6152881.1 amino acid permease [Candidatus Kapaibacterium sp.] diamond 243 83.2 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;