RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA662254", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA662254 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3713664 3713664 PRJNA662254_P_NODE_52083_length_248_cov_0.880000_g51432_i0 PRJNA662254 52083 248 0.88 2.1824 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 135 5.68e-36   NR MFM1918995.1 2030809 g51432 i0 84.1 3.96774193548387 82 13 99.2 0 3 248 35 116 MFM1918995.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 984 135 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
9556867 9556867 PRJNA662254_P_NODE_53048_length_247_cov_0.885057_g52397_i0 PRJNA662254 53048 247 0.885057 2.18609079 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 154 2.5799999999999998e-43   NR MCC6697856.1 2030809 g52397 i0 96.3 1.96761133603239 81 3 98.4 0 3 245 37 117 MCC6697856.1 IS256 family transposase [Candidatus Hydrogenedentota bacterium] diamond 486 154 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;