RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA662254", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Tayloriibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Tayloriibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA662254 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27018129 27018129 PRJNA662254_P_NODE_47602_length_250_cov_0.870056_g46951_i0 PRJNA662254 47602 250 0.870056 2.17514 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 168 1.7799999999999998e-48   NR HAO64456.1 2052153 g46951 i0 93.9 0.984 82 5 98.4 0 248 3 241 322 HAO64456.1 tRNA guanosine(34) transglycosylase Tgt [Candidatus Taylorbacteria bacterium] diamond 246 168 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
30334625 30334625 PRJNA662254_P_NODE_45812_length_251_cov_0.865169_g45161_i0 PRJNA662254 45812 251 0.865169 2.17157419 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 145 5.19e-39   NR MCX6717681.1 2052153 g45161 i0 87.8 0.9800796812749 82 10 98 0 4 249 220 301 MCX6717681.1 ComEC/Rec2 family competence protein [Candidatus Taylorbacteria bacterium] diamond 246 145 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
30461026 30461026 PRJNA662254_P_NODE_65693_length_241_cov_0.916667_g65042_i0 PRJNA662254 65693 241 0.916667 2.20916747 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 56.2 6.38e-7   NR MDB5204254.1 2052153 g65042 i0 55.1 1.63070539419087 69 26 84.6 4 224 21 1389 1453 MDB5204254.1 hypothetical protein [Candidatus Taylorbacteria bacterium] diamond 393 56.2 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;