RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA662254", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA662254 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26986401 26986401 PRJNA662254_P_NODE_57322_length_245_cov_0.895349_g56671_i0 PRJNA662254 57322 245 0.895349 2.19360505 Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_ 2052152 Bacteria Bacteria 92.4 1.37e-20   NR OGI60703.1 1801731 g56671 i0 56.9 0.881632653061225 72 30 88.2 1 28 243 3 73 OGI60703.1 MAG: hypothetical protein A2641_02265 [Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_37_25] diamond 216 92.4 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_37_25
28041225 28041225 PRJNA662254_P_NODE_59005_length_244_cov_0.900585_g58354_i0 PRJNA662254 59005 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 112 1.83e-27   NR OGI57331.1 1801729 g58354 i0 93 4.90573770491803 57 4 70.1 0 171 1 1 57 OGI57331.1 MAG: type I glyceraldehyde-3-phosphate dehydrogenase [Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_36_23] diamond 1197 112 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_36_23

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;