RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA662254" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA662254 · 7 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4456234 4456234 PRJNA662254_P_NODE_4804_length_796_cov_1.784232_g4243_i0 PRJNA662254 4804 796 1.784232 14.20248672 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 353 9.159999999999999e-113   NR XP_013762907.1 461836 g4243 i0 67.7 1.01381909547739 269 66 98.7 2 795 10 62 316 XP_013762907.1 elongation factor 2 [Thecamonas trahens ATCC 50062] diamond 807 353 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
24854701 24854701 PRJNA662254_P_NODE_6700_length_659_cov_1.964164_g6084_i0 PRJNA662254 6700 659 1.964164 12.94384076 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 61.2 7.59e-7   NR XP_013757898.1 461836 g6084 i0 29 0.660091047040971 145 92 65.6 6 91 522 3070 3204 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 435 61.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26891798 26891798 PRJNA662254_P_NODE_31701_length_295_cov_1.387387_g31050_i0 PRJNA662254 31701 295 1.387387 4.09279165 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 62.4 8.63e-9   NR XP_013759421.1 461836 g31050 i0 40.7 1.84067796610169 91 43 92.5 3 10 282 158 237 XP_013759421.1 uncharacterized protein AMSG_02502 [Thecamonas trahens ATCC 50062] diamond 543 62.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28155433 28155433 PRJNA662254_P_NODE_13005_length_456_cov_1.122715_g12354_i0 PRJNA662254 13005 456 1.122715 5.1195804 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 73.9 1.94e-13   NR XP_013758370.1 461836 g12354 i0 35.3 0.875 133 75 84.9 4 395 9 20 145 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 399 73.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29134256 29134256 PRJNA662254_P_NODE_15589_length_415_cov_3.871345_g14938_i0 PRJNA662254 15589 415 3.871345 16.06608175 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 94.7 1.03e-21   NR XP_013758370.1 461836 g14938 i0 41.5 0.975903614457831 135 71 94 3 392 3 9 140 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 405 94.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31282007 31282007 PRJNA662254_P_NODE_18495_length_381_cov_1.000000_g17844_i0 PRJNA662254 18495 381 1 3.81 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 95.9 4.29e-20   NR XP_013762491.1 461836 g17844 i0 44.3 0.834645669291339 106 53 82.7 3 3 317 502 602 XP_013762491.1 saposin A [Thecamonas trahens ATCC 50062] diamond 318 95.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31756564 31756564 PRJNA662254_P_NODE_4977_length_779_cov_0.966006_g4411_i0 PRJNA662254 4977 779 0.966006 7.52518674 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 82 1.6e-13   NR XP_013757898.1 461836 g4411 i0 31.7 0.862644415917843 224 120 79.7 11 58 678 2995 3202 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 672 82 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;