RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA661142" and tax_phylum = "Candidatus Calescibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Calescibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA661142 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28817967 28817967 PRJNA661142_P_NODE_11568_length_166_cov_0.871795_g11503_i0 PRJNA661142 11568 166 0.871795 1.4471797 Candidatus Calescamantes bacterium 2268183 Bacteria Bacteria 77.4 3.1e-15   NR MCD6219380.1 2268183 g11503 i0 72.5 2.69277108433735 51 14 92.2 0 2 154 232 282 MCD6219380.1 glucosamine-6-phosphate isomerase [Candidatus Calescamantes bacterium] diamond 447 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Calescibacteriota         Candidatus Calescamantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;