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contig_metadata

35 rows where bioproject = "PRJNA661142" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 35 ✖

tax_kingdom 1

bioproject 1

  • PRJNA661142 · 35 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
628132 628132 PRJNA661142_P_NODE_2941_length_459_cov_5.075610_g2878_i0 PRJNA661142 2941 459 5.07561 23.2970499 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 102 1.16e-24   NR HSI88929.1 2283092 g2878 i0 76.6 1.24183006535948 64 15 41.8 0 241 432 2 65 HSI88929.1 RNA-binding protein [Pyrinomonadaceae bacterium] diamond 570 102 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
9556642 9556642 PRJNA661142_P_NODE_4548_length_365_cov_5.240506_g4483_i0 PRJNA661142 4548 365 5.240506 19.1278469 Acidobacteriota bacterium 1978231 Bacteria Bacteria 551 2.799999999999999e-152   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g4483 i0 96.165 178.123287671233 339 9 92 4 18 353 3299125 3299462 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 65015 551 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
13382165 13382165 PRJNA661142_P_NODE_12011_length_164_cov_0.886957_g11946_i0 PRJNA661142 12011 164 0.886957 1.45460948 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 196 5.98e-46   NTclustered gi|2874253693|emb|OY969419.1| 194844 g11946 i0 88.623 122.518292682927 167 12 100 7 1 164 5895675 5895513 MAG: uncultured Acidobacteriaceae bacterium isolate MFD03346.bin.1.13 genome assembly, chromosome: 1 blastn 20093 196 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
17206155 17206155 PRJNA661142_P_NODE_4254_length_378_cov_5.413374_g4189_i0 PRJNA661142 4254 378 5.413374 20.46255372 Acidobacteriota bacterium 1978231 Bacteria Bacteria 171 9.53e-38   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g4189 i0 82.474 20.521164021164 194 34 51 0 96 289 538744 538937 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 7757 171 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
19013208 19013208 PRJNA661142_P_NODE_12635_length_161_cov_0.910714_g12570_i0 PRJNA661142 12635 161 0.910714 1.46624954 Acidobacteriota bacterium 1978231 Bacteria Bacteria 96.7 1.07e-21   NR MDE3137954.1 1978231 g12570 i0 94.3 0.987577639751553 53 3 98.8 0 160 2 117 169 MDE3137954.1 response regulator [Acidobacteriota bacterium] diamond 159 96.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
19755109 19755109 PRJNA661142_P_NODE_7016_length_289_cov_0.850000_g6951_i0 PRJNA661142 7016 289 0.85 2.4565 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 272 1.89e-68   NTclustered gi|2874253709|emb|OY969474.1| 171953 g6951 i0 84.561 38.8477508650519 285 33 96 11 12 289 71915 71635 MAG: uncultured Acidobacteriota bacterium isolate MFD05747.bin.1.131 genome assembly, chromosome: 1 blastn 11227 272 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
19755145 19755145 PRJNA661142_P_NODE_9716_length_222_cov_2.335260_g9651_i0 PRJNA661142 9716 222 2.33526 5.1842772 Tunturiibacter lichenicola 2051959 Bacteria Bacteria 58.4 4.23e-4   NTclustered gi|2304905231|gb|CP073696.1| 2051959 g9651 i0 100 1.4954954954955 31 0 14 0 127 157 1113208 1113238 Tunturiibacter lichenicola strain DSM 104462 chromosome, complete genome blastn 332 58.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Tunturiibacter Tunturiibacter lichenicola
22305418 22305418 PRJNA661142_P_NODE_5038_length_346_cov_2.121212_g4973_i0 PRJNA661142 5038 346 2.121212 7.33939352 Chloracidobacterium 458032 Bacteria Bacteria 159 1.04e-45   NR MCC7306765.1 1978231 g4973 i0 70.8 4.58670520231214 106 31 91.9 0 1 318 56 161 MCC7306765.1 dihydropteroate synthase [Acidobacteriota bacterium] diamond 1587 159 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
22305466 22305466 PRJNA661142_P_NODE_9898_length_218_cov_1.047337_g9833_i0 PRJNA661142 9898 218 1.047337 2.28319466 Acidobacteriota bacterium 1978231 Bacteria Bacteria 226 1.07e-54   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g9833 i0 88.021 230.683486238532 192 22 88 1 1 191 3298423 3298232 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 50289 226 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27492266 27492266 PRJNA661142_P_NODE_12143_length_164_cov_0.886957_g12078_i0 PRJNA661142 12143 164 0.886957 1.45460948 Acidobacteriota bacterium 1978231 Bacteria Bacteria 108 6.96e-28   NR MDM7995816.1 1978231 g12078 i0 92.6 0.98780487804878 54 4 98.8 0 3 164 118 171 MDM7995816.1 J domain-containing protein [Acidobacteriota bacterium] diamond 162 108 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28009753 28009753 PRJNA661142_P_NODE_6785_length_294_cov_0.832653_g6720_i0 PRJNA661142 6785 294 0.832653 2.44799982 Pseudomonadati 3379134 Bacteria Bacteria 102 7.42e-23   NR MDR3676761.1 1978231 g6720 i0 57.5 6.40816326530612 87 37 88.8 0 293 33 684 770 MDR3676761.1 PAS domain S-box protein [Acidobacteriota bacterium] diamond 1884 103 0.990291262135922 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28092052 28092052 PRJNA661142_P_NODE_10705_length_191_cov_2.154930_g10640_i0 PRJNA661142 10705 191 2.15493 4.1159163 Chloracidobacterium sp. 2099375 Bacteria Bacteria 61.2 5.56e-9   NR MBK8303983.1 2099375 g10640 i0 72.5 1.85340314136126 40 10 61.3 1 122 6 356 395 MBK8303983.1 GH92 family glycosyl hydrolase [Chloracidobacterium sp.] diamond 354 61.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium sp.
28249830 28249830 PRJNA661142_P_NODE_4006_length_391_cov_3.728070_g3941_i0 PRJNA661142 4006 391 3.72807 14.5767537 Blastocatellia bacterium 2052146 Bacteria Bacteria 126 8.749999999999999e-31   NR MBA2335238.1 2052146 g3941 i0 56.8 0.90537084398977 118 46 90.5 2 355 2 770 882 MBA2335238.1 translocation/assembly module TamB domain-containing protein [Blastocatellia bacterium] diamond 354 126 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28514794 28514794 PRJNA661142_P_NODE_12227_length_163_cov_0.894737_g12162_i0 PRJNA661142 12227 163 0.894737 1.45842131 Bryobacterales 332160 Bacteria Bacteria 94.7 2.25e-21   NR MBI3210728.1 332163 g12162 i0 80.8 11.521472392638 52 10 95.7 0 161 6 282 333 MBI3210728.1 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase [Candidatus Solibacter usitatus] diamond 1878 95.5 0.991623036649215 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Solibacter Candidatus Solibacter usitatus
28565679 28565679 PRJNA661142_P_NODE_12287_length_163_cov_0.894737_g12222_i0 PRJNA661142 12287 163 0.894737 1.45842131 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 75.1 4.95e-14   NR HLJ29356.1 2976921 g12222 i0 61.1 0.993865030674847 54 21 99.4 0 1 162 512 565 HLJ29356.1 DUF3857 domain-containing protein [Candidatus Angelobacter sp.] diamond 162 75.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
28786526 28786526 PRJNA661142_P_NODE_12427_length_162_cov_0.902655_g12362_i0 PRJNA661142 12427 162 0.902655 1.4623011 Terriglobia bacterium 2081523 Bacteria Bacteria 105 2.09e-25   NR MBZ5725992.1 2081523 g12362 i0 88.7 3.87037037037037 53 6 98.1 0 160 2 90 142 MBZ5725992.1 glycine cleavage system aminomethyltransferase GcvT [Terriglobia bacterium] diamond 627 105 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
29165820 29165820 PRJNA661142_P_NODE_11629_length_166_cov_0.871795_g11564_i0 PRJNA661142 11629 166 0.871795 1.4471797 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 111 5.53e-29   NR HEX4593840.1 2212468 g11564 i0 89.1 9.93975903614458 55 6 99.4 0 165 1 132 186 HEX4593840.1 DNA oxidative demethylase AlkB [Bryobacteraceae bacterium] diamond 1650 111 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
29745863 29745863 PRJNA661142_P_NODE_11690_length_166_cov_0.871795_g11625_i0 PRJNA661142 11690 166 0.871795 1.4471797 Bacteria 2 Bacteria Bacteria 86.3 3.18e-18   NR OFV85590.1 1797174 g11625 i0 72.7 5.96385542168675 55 15 99.4 0 1 165 87 141 OFV85590.1 MAG: hypothetical protein A2V74_10610 [Acidobacteria bacterium RBG_16_70_10] diamond 990 86.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium RBG_16_70_10
29955077 29955077 PRJNA661142_P_NODE_11431_length_167_cov_0.864407_g11366_i0 PRJNA661142 11431 167 0.864407 1.44355969 Terriglobia bacterium 2081523 Bacteria Bacteria 87.4 7.78e-19   NR MBZ5705515.1 2081523 g11366 i0 75.5 1.90419161676647 53 13 95.2 0 162 4 192 244 MBZ5705515.1 glycosyltransferase family 2 protein [Terriglobia bacterium] diamond 318 87.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
30018365 30018365 PRJNA661142_P_NODE_12031_length_164_cov_0.886957_g11966_i0 PRJNA661142 12031 164 0.886957 1.45460948 Acidobacteriota bacterium 1978231 Bacteria Bacteria 99.8 3.0799999999999994e-24   NR MBI4915630.1 1978231 g11966 i0 98.1 0.98780487804878 54 1 98.8 0 1 162 51 104 MBI4915630.1 cytochrome c biogenesis protein CcsA [Acidobacteriota bacterium] diamond 162 99.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30176072 30176072 PRJNA661142_P_NODE_11492_length_167_cov_0.864407_g11427_i0 PRJNA661142 11492 167 0.864407 1.44355969 Acidobacteriota bacterium 1978231 Bacteria Bacteria 114 2.2399999999999993e-28   NR MEK7753101.1 1978231 g11427 i0 98.2 0.988023952095808 55 1 98.8 0 167 3 84 138 MEK7753101.1 transposase [Acidobacteriota bacterium] diamond 165 114 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30219907 30219907 PRJNA661142_P_NODE_12712_length_161_cov_0.910714_g12647_i0 PRJNA661142 12712 161 0.910714 1.46624954 Bacteria 2 Bacteria Bacteria 106 1.41e-25   NR MBX6362184.1 1382359 g12647 i0 92.5 2.94409937888199 53 4 98.8 0 1 159 105 157 MBX6362184.1 group II intron reverse transcriptase/maturase [Pseudacidobacterium ailaaui] diamond 474 106 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Pseudacidobacterium Pseudacidobacterium ailaaui
30219908 30219908 PRJNA661142_P_NODE_6852_length_292_cov_1.679012_g6787_i0 PRJNA661142 6852 292 1.679012 4.90271504 Bacteria 2 Bacteria Bacteria 115 1.34e-27   NR MBV9211322.1 1978231 g6787 i0 69 4.33561643835616 87 26 88.4 1 33 290 23 109 MBV9211322.1 TonB-dependent receptor [Acidobacteriota bacterium] diamond 1266 115 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30334593 30334593 PRJNA661142_P_NODE_12192_length_163_cov_0.894737_g12127_i0 PRJNA661142 12192 163 0.894737 1.45842131 Terriglobales bacterium 2282142 Bacteria Bacteria 61.2 3.75e-9   NR HYE91712.1 2282142 g12127 i0 65.4 0.957055214723926 52 18 95.7 0 160 5 358 409 HYE91712.1 flagellar filament capping protein FliD [Terriglobales bacterium] diamond 156 61.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
30429344 30429344 PRJNA661142_P_NODE_11973_length_164_cov_1.330435_g11908_i0 PRJNA661142 11973 164 1.330435 2.1819134 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 79.7 5.69e-17   NR HZU28967.1 2212468 g11908 i0 68.5 2.94512195121951 54 17 98.8 0 1 162 67 120 HZU28967.1 ferritin-like domain-containing protein [Bryobacteraceae bacterium] diamond 483 79.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30492198 30492198 PRJNA661142_P_NODE_12313_length_163_cov_0.894737_g12248_i0 PRJNA661142 12313 163 0.894737 1.45842131 Acidobacteriota bacterium 1978231 Bacteria Bacteria 110 1.7700000000000002e-26   NR NMD10639.1 1978231 g12248 i0 92.6 1.98773006134969 54 4 99.4 0 163 2 1165 1218 NMD10639.1 hypothetical protein [Acidobacteriota bacterium] diamond 324 110 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30776602 30776602 PRJNA661142_P_NODE_12414_length_162_cov_0.902655_g12349_i0 PRJNA661142 12414 162 0.902655 1.4623011 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 78.6 1.89e-15   NR HWQ54730.1 2212468 g12349 i0 71.2 1.92592592592593 52 15 96.3 0 158 3 115 166 HWQ54730.1 mannose-1-phosphate guanylyltransferase [Bryobacteraceae bacterium] diamond 312 78.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30934589 30934589 PRJNA661142_P_NODE_11894_length_165_cov_0.879310_g11829_i0 PRJNA661142 11894 165 0.87931 1.4508615 Acidobacteriota bacterium 1978231 Bacteria Bacteria 86.3 5.92e-18   NR MBI4874429.1 1978231 g11829 i0 69.1 2 55 17 100 0 165 1 424 478 MBI4874429.1 iron ABC transporter permease [Acidobacteriota bacterium] diamond 330 86.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31693250 31693250 PRJNA661142_P_NODE_12317_length_163_cov_0.894737_g12252_i0 PRJNA661142 12317 163 0.894737 1.45842131 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 57.8 6.32e-8   NR HEV8366356.1 2283092 g12252 i0 60 1.84049079754601 50 20 92 0 13 162 674 723 HEV8366356.1 ABC transporter permease [Pyrinomonadaceae bacterium] diamond 300 57.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31819697 31819697 PRJNA661142_P_NODE_12737_length_161_cov_0.910714_g12672_i0 PRJNA661142 12737 161 0.910714 1.46624954 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 84.3 2.66e-17   NR HEY8226767.1 2283092 g12672 i0 86.3 3.80124223602484 51 7 95 0 160 8 754 804 HEY8226767.1 ABC transporter permease [Pyrinomonadaceae bacterium] diamond 612 84.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31851297 31851297 PRJNA661142_P_NODE_12517_length_162_cov_0.902655_g12452_i0 PRJNA661142 12517 162 0.902655 1.4623011 Acidobacteria bacterium RBG_13_68_16 1797171 Bacteria Bacteria 80.1 1.29e-16   NR OFV82455.1 1797171 g12452 i0 77.6 0.907407407407407 49 11 90.7 0 15 161 3 51 OFV82455.1 MAG: hypothetical protein A2Y78_02200 [Acidobacteria bacterium RBG_13_68_16] diamond 147 80.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium RBG_13_68_16
32053426 32053426 PRJNA661142_P_NODE_11338_length_167_cov_0.864407_g11273_i0 PRJNA661142 11338 167 0.864407 1.44355969 Terriglobia 204432 Bacteria Bacteria 59.3 8.33e-9   NR HTF65895.1 1934404 g11273 i0 76.5 2.47904191616766 34 8 61.1 0 58 159 1 34 HTF65895.1 pyridoxamine 5'-phosphate oxidase family protein [Edaphobacter sp.] diamond 414 59.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
32072932 32072932 PRJNA661142_P_NODE_12278_length_163_cov_0.894737_g12213_i0 PRJNA661142 12278 163 0.894737 1.45842131 Terriglobia bacterium 2081523 Bacteria Bacteria 66.6 3.66e-11   NR MBZ5564195.1 2081523 g12213 i0 56.6 0.975460122699387 53 23 97.5 0 161 3 172 224 MBZ5564195.1 MlaD family protein [Terriglobia bacterium] diamond 159 66.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
32831046 32831046 PRJNA661142_P_NODE_11580_length_166_cov_0.871795_g11515_i0 PRJNA661142 11580 166 0.871795 1.4471797 Acidobacteriota bacterium 1978231 Bacteria Bacteria 58.9 2.58e-8   NR HMA53369.1 1978231 g11515 i0 53.8 0.939759036144578 52 24 94 0 165 10 103 154 HMA53369.1 SEC-C metal-binding domain-containing protein [Acidobacteriota bacterium] diamond 156 58.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32831048 32831048 PRJNA661142_P_NODE_4660_length_361_cov_2.288462_g4595_i0 PRJNA661142 4660 361 2.288462 8.26134782 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 82.8 1.59e-17   NR HEV8592186.1 2283092 g4595 i0 57.5 0.664819944598338 80 32 66.5 2 333 94 40 117 HEV8592186.1 carboxypeptidase-like regulatory domain-containing protein [Pyrinomonadaceae bacterium] diamond 240 82.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;