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contig_metadata

21 rows where bioproject = "PRJNA661142", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 21 ✖

tax_kingdom 1

  • Pseudomonadati · 21 ✖

bioproject 1

  • PRJNA661142 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3178995 3178995 PRJNA661142_P_NODE_12203_length_163_cov_0.894737_g12138_i0 PRJNA661142 12203 163 0.894737 1.45842131 Desulfobaccales bacterium 3064668 Bacteria Bacteria 113 5.34e-29   NR HZK12887.1 3064668 g12138 i0 100 6.95705521472393 54 0 99.4 0 162 1 178 231 HZK12887.1 FAD-binding protein [Desulfobaccales bacterium] diamond 1134 113 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobaccia Desulfobaccales     Desulfobaccales bacterium
7006692 7006692 PRJNA661142_P_NODE_11406_length_167_cov_0.864407_g11341_i0 PRJNA661142 11406 167 0.864407 1.44355969 Desulfobacterales bacterium 2044940 Bacteria Bacteria 108 5.37e-26   NR MCU0590495.1 2044940 g11341 i0 96.4 2.92814371257485 55 2 98.8 0 1 165 425 479 MCU0590495.1 fatty acyl-AMP ligase [Desulfobacterales bacterium] diamond 489 108 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
7006696 7006696 PRJNA661142_P_NODE_11846_length_165_cov_0.879310_g11781_i0 PRJNA661142 11846 165 0.87931 1.4508615 Geomonas nitrogeniifigens 2843197 Bacteria Bacteria 300 4.46e-77   NTclustered gi|2060223057|gb|CP077684.1| 2847991 g11781 i0 99.398 8.3030303030303 166 0 100 1 1 165 2567760 2567595 Geomonas nitrogeniifigens strain RF4 chromosome, complete genome blastn 1370 300 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geomonas Geomonas nitrogeniifigens
17206183 17206183 PRJNA661142_P_NODE_7654_length_274_cov_1.133333_g7589_i0 PRJNA661142 7654 274 1.133333 3.10533242 Desulfomicrobium sp. ZS1 2952228 Bacteria Bacteria 455 1.64e-123   NTclustered gi|2269306666|gb|CP100351.1| 2952228 g7589 i0 100 252.496350364963 246 0 90 0 1 246 2625286 2625531 Desulfomicrobium sp. ZS1 chromosome, complete genome blastn 69184 455 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfomicrobiaceae Desulfomicrobium Desulfomicrobium sp. ZS1
27302793 27302793 PRJNA661142_P_NODE_11403_length_167_cov_0.864407_g11338_i0 PRJNA661142 11403 167 0.864407 1.44355969 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 51.6 5.74e-7   NR MEW6657181.1 2202153 g11338 i0 88.9 0.48502994011976 27 3 48.5 0 167 87 40 66 MEW6657181.1 cold-shock protein [Thermodesulfobacteriota bacterium] diamond 81 51.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
28060462 28060462 PRJNA661142_P_NODE_11865_length_165_cov_0.879310_g11800_i0 PRJNA661142 11865 165 0.87931 1.4508615 Syntrophaceae bacterium 2052184 Bacteria Bacteria 111 5.25e-27   NR NTW16117.1 2052184 g11800 i0 100 0.981818181818182 54 0 98.2 0 163 2 39 92 NTW16117.1 type IV pilus secretin PilQ [Syntrophaceae bacterium] diamond 162 111 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
28471119 28471119 PRJNA661142_P_NODE_11986_length_164_cov_0.886957_g11921_i0 PRJNA661142 11986 164 0.886957 1.45460948 Syntrophobacteraceae bacterium CG23_combo_of_CG 2052185 Bacteria Bacteria 77.4 4.06e-17   NR PIP06372.1 1974096 g11921 i0 68.5 4.9390243902439 54 17 98.8 0 163 2 8 61 PIP06372.1 MAG: hypothetical protein COX51_09025, partial [Syntrophobacteraceae bacterium CG23_combo_of_CG06-09_8_20_14_all_50_8] diamond 810 77.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae   Syntrophobacteraceae bacterium CG23_combo_of_CG06-09_8_20_14_all_50_8
29071094 29071094 PRJNA661142_P_NODE_11728_length_166_cov_0.871795_g11663_i0 PRJNA661142 11728 166 0.871795 1.4471797 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 90.9 2.71e-20   NR HYA92027.1 2202153 g11663 i0 83.3 0.975903614457831 54 9 97.6 0 163 2 178 231 HYA92027.1 xanthine dehydrogenase family protein subunit M [Thermodesulfobacteriota bacterium] diamond 162 90.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30049631 30049631 PRJNA661142_P_NODE_12051_length_164_cov_0.886957_g11986_i0 PRJNA661142 12051 164 0.886957 1.45460948 Desulfohalobiaceae bacterium 2683721 Bacteria Bacteria 75.5 3.61e-14   NR MCF8106865.1 2683721 g11986 i0 67.3 1.9390243902439 52 17 95.1 0 1 156 207 258 MCF8106865.1 PAS domain S-box protein [Desulfohalobiaceae bacterium] diamond 318 75.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae   Desulfohalobiaceae bacterium
30713274 30713274 PRJNA661142_P_NODE_12334_length_163_cov_0.894737_g12269_i0 PRJNA661142 12334 163 0.894737 1.45842131 Syntrophaceae bacterium 2052184 Bacteria Bacteria 60.8 4.93e-9   NR MEN6464652.1 2052184 g12269 i0 54.7 0.975460122699387 53 24 97.5 0 161 3 47 99 MEN6464652.1 SpoIID/LytB domain-containing protein [Syntrophaceae bacterium] diamond 159 60.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
30902943 30902943 PRJNA661142_P_NODE_12234_length_163_cov_0.894737_g12169_i0 PRJNA661142 12234 163 0.894737 1.45842131 Syntrophobacteria bacterium 3024410 Bacteria Bacteria 43.5 0.00611   NR HVO84157.1 3024410 g12169 i0 43.2 0.809815950920245 44 24 79.1 1 133 5 6 49 HVO84157.1 PEP-CTERM sorting domain-containing protein [Syntrophobacteria bacterium] diamond 132 43.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria       Syntrophobacteria bacterium
31029504 31029504 PRJNA661142_P_NODE_12135_length_164_cov_0.886957_g12070_i0 PRJNA661142 12135 164 0.886957 1.45460948 Desulfobacterales bacterium 2044940 Bacteria Bacteria 85.1 1.65e-18   NR MDO8944357.1 2044940 g12070 i0 80.8 2.89024390243902 52 10 95.1 0 161 6 109 160 MDO8944357.1 MFS transporter [Desulfobacterales bacterium] diamond 474 85.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
31029506 31029506 PRJNA661142_P_NODE_5735_length_323_cov_0.930657_g5670_i0 PRJNA661142 5735 323 0.930657 3.00602211 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 100 4.6e-23   NR HEX7127777.1 2202153 g5670 i0 63.9 0.668730650154799 72 26 66.9 0 3 218 230 301 HEX7127777.1 alpha/beta hydrolase [Thermodesulfobacteriota bacterium] diamond 216 100 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31186946 31186946 PRJNA661142_P_NODE_12255_length_163_cov_0.894737_g12190_i0 PRJNA661142 12255 163 0.894737 1.45842131 Desulfomonile tiedjei 2358 Bacteria Bacteria 80.9 3.82e-16   NR MBI5251393.1 2358 g12190 i0 75.5 2.92638036809816 53 13 97.5 0 160 2 310 362 MBI5251393.1 ABC transporter substrate-binding protein [Desulfomonile tiedjei] diamond 477 80.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfomonilia Desulfomonilales Desulfomonilaceae Desulfomonile Desulfomonile tiedjei
31262665 31262665 PRJNA661142_P_NODE_12655_length_161_cov_0.910714_g12590_i0 PRJNA661142 12655 161 0.910714 1.46624954 Pseudomonadati 3379134 Bacteria Bacteria 82.8 9.24e-17   NR TET84539.1 2049433 g12590 i0 71.7 2.96273291925466 53 15 98.8 0 3 161 211 263 TET84539.1 MAG: hypothetical protein E3J46_10955, partial [Desulfobacteraceae bacterium] diamond 477 82.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
31693251 31693251 PRJNA661142_P_NODE_9137_length_238_cov_1.365079_g9072_i0 PRJNA661142 9137 238 1.365079 3.24888802 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 45.4 0.00396   NR HEX7127293.1 2202153 g9072 i0 68.8 0.403361344537815 32 10 40.3 0 2 97 76 107 HEX7127293.1 prohead protease/major capsid protein fusion protein [Thermodesulfobacteriota bacterium] diamond 96 45.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31756538 31756538 PRJNA661142_P_NODE_11517_length_167_cov_0.864407_g11452_i0 PRJNA661142 11517 167 0.864407 1.44355969 Syntrophobacteraceae bacterium 2052185 Bacteria Bacteria 80.5 1.4e-16   NR HQN17943.1 2052185 g11452 i0 74.5 0.988023952095808 55 14 98.8 0 167 3 68 122 HQN17943.1 hypothetical protein [Syntrophobacteraceae bacterium] diamond 165 80.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae   Syntrophobacteraceae bacterium
32263038 32263038 PRJNA661142_P_NODE_11838_length_165_cov_0.879310_g11773_i0 PRJNA661142 11838 165 0.87931 1.4508615 Syntrophobacter sp. 66700 Bacteria Bacteria 78.6 4.75e-16   NR MEN6440645.1 66700 g11773 i0 67.3 0.945454545454545 52 17 94.5 0 3 158 39 90 MEN6440645.1 DUF1614 domain-containing protein [Syntrophobacter sp.] diamond 156 78.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae Syntrophobacter Syntrophobacter sp.
32641795 32641795 PRJNA661142_P_NODE_11460_length_167_cov_0.864407_g11395_i0 PRJNA661142 11460 167 0.864407 1.44355969 Desulfobaccales bacterium 3064668 Bacteria Bacteria 107 1.87e-26   NR MFA4903734.1 3064668 g11395 i0 98.1 0.952095808383233 53 1 95.2 0 160 2 198 250 MFA4903734.1 NADH-quinone oxidoreductase subunit NuoH [Desulfobaccales bacterium] diamond 159 107 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobaccia Desulfobaccales     Desulfobaccales bacterium
32767956 32767956 PRJNA661142_P_NODE_12000_length_164_cov_0.886957_g11935_i0 PRJNA661142 12000 164 0.886957 1.45460948 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 80.9 4.61e-16   NR HVP79336.1 2202153 g11935 i0 64.8 2.96341463414634 54 19 98.8 0 1 162 2509 2562 HVP79336.1 PKD domain-containing protein [Thermodesulfobacteriota bacterium] diamond 486 80.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32893830 32893830 PRJNA661142_P_NODE_11700_length_166_cov_0.871795_g11635_i0 PRJNA661142 11700 166 0.871795 1.4471797 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 81.3 2.39e-16   NR HJX60466.1 2202153 g11635 i0 77.8 0.975903614457831 54 12 97.6 0 3 164 119 172 HJX60466.1 MFS transporter [Thermodesulfobacteriota bacterium] diamond 162 81.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;