contig_metadata
11 rows where bioproject = "PRJNA661142", tax_kingdom = "Pseudomonadati" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26701397 | 26701397 | PRJNA661142_P_NODE_11621_length_166_cov_0.871795_g11556_i0 | PRJNA661142 | 11621 | 166 | 0.871795 | 1.4471797 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 57 | 1.22e-7 | NR | NJD55137.1 | 2026887 | g11556 | i0 | 51.9 | 0.975903614457831 | 54 | 26 | 97.6 | 0 | 5 | 166 | 1 | 54 | NJD55137.1 hypothetical protein [Nitrospirota bacterium] | diamond | 162 | 57 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 27618618 | 27618618 | PRJNA661142_P_NODE_12204_length_163_cov_0.894737_g12139_i0 | PRJNA661142 | 12204 | 163 | 0.894737 | 1.45842131 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 63.2 | 7.39e-10 | NR | MBS1243022.1 | 2026887 | g12139 | i0 | 70.2 | 0.865030674846626 | 47 | 9 | 86.5 | 1 | 144 | 4 | 2 | 43 | MBS1243022.1 hypothetical protein [Nitrospirota bacterium] | diamond | 141 | 63.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 28029074 | 28029074 | PRJNA661142_P_NODE_11445_length_167_cov_0.864407_g11380_i0 | PRJNA661142 | 11445 | 167 | 0.864407 | 1.44355969 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 107 | 1.11e-25 | NR | MDA8387952.1 | 2026770 | g11380 | i0 | 100 | 0.988023952095808 | 55 | 0 | 98.8 | 0 | 3 | 167 | 111 | 165 | MDA8387952.1 AsmA family protein [Nitrospiraceae bacterium] | diamond | 165 | 107 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 28849687 | 28849687 | PRJNA661142_P_NODE_12668_length_161_cov_0.910714_g12603_i0 | PRJNA661142 | 12668 | 161 | 0.910714 | 1.46624954 | Candidatus Sulfobium mesophilum | 2016548 | Bacteria | Bacteria | 103 | 2.12e-24 | NR | SPQ01045.1 | 2016548 | g12603 | i0 | 84.9 | 0.987577639751553 | 53 | 8 | 98.8 | 0 | 160 | 2 | 136 | 188 | SPQ01045.1 conserved exported hypothetical protein [Candidatus Sulfobium mesophilum] | diamond | 159 | 103 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Candidatus Sulfobium | Candidatus Sulfobium mesophilum | ||
| 29892036 | 29892036 | PRJNA661142_P_NODE_12191_length_163_cov_0.894737_g12126_i0 | PRJNA661142 | 12191 | 163 | 0.894737 | 1.45842131 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 80.1 | 3.77e-17 | NR | HSA78355.1 | 2026887 | g12126 | i0 | 71.7 | 0.975460122699387 | 53 | 15 | 97.5 | 0 | 163 | 5 | 82 | 134 | HSA78355.1 redoxin domain-containing protein [Nitrospirota bacterium] | diamond | 159 | 80.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 30586766 | 30586766 | PRJNA661142_P_NODE_12673_length_161_cov_0.910714_g12608_i0 | PRJNA661142 | 12673 | 161 | 0.910714 | 1.46624954 | Thermodesulfovibrionales bacterium | 2814272 | Bacteria | Bacteria | 94 | 8.810000000000001e-21 | NR | HXX53849.1 | 2814272 | g12608 | i0 | 88.2 | 1.93788819875776 | 51 | 6 | 95 | 0 | 9 | 161 | 146 | 196 | HXX53849.1 phosphomannomutase/phosphoglucomutase [Thermodesulfovibrionales bacterium] | diamond | 312 | 94 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Thermodesulfovibrionia | Thermodesulfovibrionales | Thermodesulfovibrionales bacterium | ||||
| 30598972 | 30598972 | PRJNA661142_P_NODE_12093_length_164_cov_0.886957_g12028_i0 | PRJNA661142 | 12093 | 164 | 0.886957 | 1.45460948 | Nitrospira | 1234 | Bacteria | Bacteria | 84 | 1.18e-17 | NR | MBM4147127.1 | 70125 | g12028 | i0 | 74.1 | 3.95121951219512 | 54 | 14 | 98.8 | 0 | 163 | 2 | 170 | 223 | MBM4147127.1 hypothetical protein [Nitrospira sp.] | diamond | 648 | 84.7 | 0.991735537190083 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31535329 | 31535329 | PRJNA661142_P_NODE_12596_length_162_cov_0.858407_g12531_i0 | PRJNA661142 | 12596 | 162 | 0.858407 | 1.39061934 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 70.5 | 5.68e-14 | NR | HET6365281.1 | 2026887 | g12531 | i0 | 75.7 | 1.46296296296296 | 37 | 9 | 68.5 | 0 | 51 | 161 | 4 | 40 | HET6365281.1 DUF3795 domain-containing protein [Nitrospirota bacterium] | diamond | 237 | 70.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 31673731 | 31673731 | PRJNA661142_P_NODE_11377_length_167_cov_0.864407_g11312_i0 | PRJNA661142 | 11377 | 167 | 0.864407 | 1.44355969 | Bacteria | 2 | Bacteria | Bacteria | 93.2 | 1.3400000000000002e-21 | NR | OGW33727.1 | 1801696 | g11312 | i0 | 72.2 | 6.82634730538922 | 54 | 15 | 97 | 0 | 1 | 162 | 165 | 218 | OGW33727.1 MAG: hypothetical protein A2X58_06505 [Nitrospirae bacterium GWC2_56_14] | diamond | 1140 | 93.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirae bacterium GWC2_56_14 | ||||||
| 31693249 | 31693249 | PRJNA661142_P_NODE_11997_length_164_cov_0.886957_g11932_i0 | PRJNA661142 | 11997 | 164 | 0.886957 | 1.45460948 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 83.2 | 3.85e-18 | NR | MDA8099069.1 | 2026770 | g11932 | i0 | 75.9 | 0.98780487804878 | 54 | 13 | 98.8 | 0 | 164 | 3 | 113 | 166 | MDA8099069.1 TetR/AcrR family transcriptional regulator [Nitrospiraceae bacterium] | diamond | 162 | 83.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 32874609 | 32874609 | PRJNA661142_P_NODE_11000_length_183_cov_1.141791_g10935_i0 | PRJNA661142 | 11000 | 183 | 1.141791 | 2.08947753 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 73.9 | 1.71e-13 | NR | HRB14792.1 | 70125 | g10935 | i0 | 72.7 | 1.80327868852459 | 55 | 15 | 90.2 | 0 | 183 | 19 | 1037 | 1091 | HRB14792.1 DEAD/DEAH box helicase family protein [Nitrospira sp.] | diamond | 330 | 74.3 | 0.994616419919246 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;