RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA661142", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA661142 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28029075 28029075 PRJNA661142_P_NODE_11825_length_165_cov_0.879310_g11760_i0 PRJNA661142 11825 165 0.87931 1.4508615 Armatimonadia bacterium 2663015 Bacteria Bacteria 97.8 4.8e-22   NR MEN6344785.1 2663015 g11760 i0 77.8 1.98181818181818 54 12 98.2 0 162 1 379 432 MEN6344785.1 CTP synthase [Armatimonadia bacterium] diamond 327 97.8 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
28376178 28376178 PRJNA661142_P_NODE_7826_length_270_cov_0.923077_g7761_i0 PRJNA661142 7826 270 0.923077 2.4923079 Armatimonadota bacterium 2033014 Bacteria Bacteria 191 2.8299999999999997e-60   NR MCL6534025.1 2033014 g7761 i0 98.9 0.988888888888889 89 1 98.9 0 269 3 58 146 MCL6534025.1 cytochrome P460 family protein [Armatimonadota bacterium] diamond 267 191 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30303030 30303030 PRJNA661142_P_NODE_12772_length_161_cov_0.910714_g12707_i0 PRJNA661142 12772 161 0.910714 1.46624954 Armatimonadota bacterium 2033014 Bacteria Bacteria 74.7 1.97e-14   NR MCS7254482.1 2033014 g12707 i0 71.2 4.86335403726708 52 15 96.9 0 160 5 117 168 MCS7254482.1 hypothetical protein [Armatimonadota bacterium] diamond 783 74.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;