RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA661142", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA661142 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1904277 1904277 PRJNA661142_P_NODE_5322_length_336_cov_6.623693_g5257_i0 PRJNA661142 5322 336 6.623693 22.25560848 Megascolecidae sp. SC201726-07 2484080 Annelida Annelida 113 1.43e-20   NTclustered gi|1772367013|gb|MK098689.1| 2484080 g5257 i0 84.034 19.0446428571429 119 17 35 2 216 333 686 569 Megascolecidae sp. SC201726-07 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial blastn 6399 113 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Megascolecidae   Megascolecidae sp. SC201726-07
12107562 12107562 PRJNA661142_P_NODE_9650_length_224_cov_1.748571_g9585_i0 PRJNA661142 9650 224 1.748571 3.91679904 Hirudo verbana 311461 Annelida Annelida 58.4 4.28e-4   NTclustered gi|2918369714|emb|OZ237790.1| 311461 g9585 i0 100 1.29910714285714 31 0 14 0 33 63 3728493 3728463 Hirudo verbana genome assembly, chromosome: 12 blastn 291 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;