RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA661142" and tax_clade = "MCG-1"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • MCG-1 · 1 ✖

bioproject 1

  • PRJNA661142 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31547536 31547536 PRJNA661142_P_NODE_11576_length_166_cov_0.871795_g11511_i0 PRJNA661142 11576 166 0.871795 1.4471797 Archaea 2157 Archaea Archaea 79 8.97e-18   NR KON29633.1 1685124 g11511 i0 65.4 7.30120481927711 52 18 94 0 3 158 13 64 KON29633.1 MAG: hypothetical protein AC477_05675 [miscellaneous Crenarchaeota group-1 archaeon SG8-32-1] diamond 1212 79.7 0.991217063989962 Archaea MCG-1 Thermoproteati Candidatus Bathyarchaeota         miscellaneous Crenarchaeota group-1 archaeon SG8-32-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;