RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA661142", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA661142 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27997513 27997513 PRJNA661142_P_NODE_12145_length_164_cov_0.886957_g12080_i0 PRJNA661142 12145 164 0.886957 1.45460948 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 69.3 3.49e-12   NR RPI06906.1 2026749 g12080 i0 62.7 1.07926829268293 59 14 93.3 1 164 12 121 179 RPI06906.1 MAG: hypothetical protein EHM64_01270 [Ignavibacteriota bacterium] diamond 177 69.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
29967267 29967267 PRJNA661142_P_NODE_11731_length_166_cov_0.871795_g11666_i0 PRJNA661142 11731 166 0.871795 1.4471797 Pseudomonadati 3379134 Bacteria Bacteria 105 1.05e-24   NR RPI02794.1 2026749 g11666 i0 94.4 13.8253012048193 54 3 97.6 0 165 4 72 125 RPI02794.1 MAG: PIG-L family deacetylase [Ignavibacteriota bacterium] diamond 2295 105 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;