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contig_metadata

25 rows where bioproject = "PRJNA658591" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 25 ✖

bioproject 1

  • PRJNA658591 · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
625468 625468 PRJNA658591_S_NODE_1241_length_367_cov_134.295597_g1178_i0 PRJNA658591 1241 367 134.295597 492.86484099 Betacoronavirus pandemicum 3418604 Viruses Viruses 71.3 9.62e-8   NTclustered gi|2565353280|emb|OY626164.1| 2697049 g1178 i0 89.655 0.517711171662125 58 3 15 3 28 82 26558 26501 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 190 71.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
1901673 1901673 PRJNA658591_S_NODE_9482_length_165_cov_36.896552_g9419_i0 PRJNA658591 9482 165 36.896552 60.8793108 Orthoavulavirus javaense 3051375 Viruses Viruses 63.9 6.37e-6   NTclustered gi|1810954291|gb|MN727300.2| 2560319 g9419 i0 100 0.206060606060606 34 0 21 0 1 34 15286 15253 Avian paramyxovirus 1 isolate chicken/Indonesia/ITA/012WJ, complete genome blastn 34 63.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthoavulavirus Orthoavulavirus javaense
3176371 3176371 PRJNA658591_S_NODE_7503_length_179_cov_1.115385_g7440_i0 PRJNA658591 7503 179 1.115385 1.99653915 Caudoviricetes sp. 2832643 Viruses Viruses 315 1.75e-81   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g7440 i0 98.324 328.77094972067 179 3 100 0 1 179 17963 18141 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 58850 315 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
5728916 5728916 PRJNA658591_S_NODE_1445_length_342_cov_44.262799_g1382_i0 PRJNA658591 1445 342 44.262799 151.37877258 Betacoronavirus pandemicum 3418604 Viruses Viruses 119 3.14e-22   NTclustered gi|2165835426|emb|OV196492.1| 2697049 g1382 i0 94.872 6.5672514619883 78 1 22 2 1 75 61 138 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 2246 119 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
7004076 7004076 PRJNA658591_S_NODE_1646_length_323_cov_5.419708_g1583_i0 PRJNA658591 1646 323 5.419708 17.50565684 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.008   NTclustered gi|2309594316|gb|OP536747.1| 10244 g1583 i0 100 8.97832817337461 29 0 9 0 71 99 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
13379584 13379584 PRJNA658591_S_NODE_2771_length_259_cov_238.561905_g2708_i0 PRJNA658591 2771 259 238.561905 617.87533395 Tequatrovirus gee9062 2844202 Viruses Viruses 80.5 1.08e-10   NTclustered gi|1595483537|gb|MK327945.1| 2502305 g2708 i0 97.826 0.32046332046332 46 1 18 0 208 253 124000 124045 Escherichia phage vB_EcoM_G4500, complete genome blastn 83 80.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Straboviridae Tequatrovirus Tequatrovirus gee9062
15928398 15928398 PRJNA658591_S_NODE_2553_length_268_cov_7.470320_g2490_i0 PRJNA658591 2553 268 7.47032 20.0204576 Caudoviricetes sp. 2832643 Viruses Viruses 63.9 1.13e-5   NTclustered gi|2059855482|tpg|BK040575.1| 2832643 g2490 i0 97.368 0.261194029850746 38 0 14 1 232 268 42 5 MAG TPA_asm: Caudoviricetes sp. isolate ctwIV1, partial genome blastn 70 63.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
17203479 17203479 PRJNA658591_S_NODE_6574_length_187_cov_4.579710_g6511_i0 PRJNA658591 6574 187 4.57971 8.5640577 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 63.9 7.39e-6   NTclustered gi|2609791700|gb|OR652422.1| 10376 g6511 i0 100 0.53475935828877 34 0 18 0 154 187 9243 9276 Human gammaherpesvirus 4 strain 725, partial genome blastn 100 63.9 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
21028015 21028015 PRJNA658591_S_NODE_2457_length_272_cov_326.735426_g2394_i0 PRJNA658591 2457 272 326.735426 888.72035872 Parapoxvirus orf 3431389 Viruses Viruses 110 1.46e-19   NTclustered gi|2755084441|gb|PP943425.1| 10258 g2394 i0 95.714 5.49632352941176 70 0 25 3 185 251 67825 67756 Orf virus isolate FX10, partial genome blastn 1495 110 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Parapoxvirus Parapoxvirus orf
21028021 21028021 PRJNA658591_S_NODE_297_length_660_cov_210.075286_g158_i1 PRJNA658591 297 660 210.075286 1386.4968876 Betacoronavirus pandemicum 3418604 Viruses Viruses 115 8.26e-21   NTclustered gi|2165836832|emb|OV197136.1| 2697049 g158 i1 94.737 0.284848484848485 76 1 11 2 1 73 41 116 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 188 115 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21028024 21028024 PRJNA658591_S_NODE_3657_length_233_cov_194.815217_g3594_i0 PRJNA658591 3657 233 194.815217 453.91945561 Klebsiella phage phiKp_32 2979986 Viruses Viruses 108 4.39e-19   NTclustered gi|2507497987|dbj|LC768500.1| 2979986 g3594 i0 94.444 2.1244635193133 72 1 30 2 7 75 1 72 Klebsiella phage phiKp_32 DNA, complete genome blastn 495 108 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Klebsiella phage phiKp_32
21028032 21028032 PRJNA658591_S_NODE_7337_length_180_cov_2.145038_g7274_i0 PRJNA658591 7337 180 2.145038 3.8610684 Ampelovirus tetravitis 3426346 Viruses Viruses 62.1 2.54e-5   NTclustered gi|2452977696|gb|OP752675.1| 70177 g7274 i0 100 0.338888888888889 33 0 18 0 148 180 13822 13854 Grapevine leafroll-associated virus 4 isolate LC9_N5, complete genome blastn 61 62.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Ampelovirus Ampelovirus tetravitis
22302771 22302771 PRJNA658591_S_NODE_858_length_425_cov_9.031915_g795_i0 PRJNA658591 858 425 9.031915 38.38563875 Achromobacter phage tuull 3074846 Viruses Viruses 69.4 4.07e-7   NTclustered gi|2618964722|gb|OR396896.1| 3074846 g795 i0 100 0.0870588235294118 37 0 9 0 9 45 36628 36664 Achromobacter phage tuull, partial genome blastn 37 69.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Achromobacter phage tuull
24851735 24851735 PRJNA658591_S_NODE_6380_length_189_cov_3.271429_g6317_i0 PRJNA658591 6380 189 3.271429 6.18300081 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.001   NTclustered gi|1465382783|emb|LS992247.1| 10376 g6317 i0 97.059 0.35978835978836 34 0 17 1 1 33 58024 58057 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 68 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
27302772 27302772 PRJNA658591_S_NODE_8823_length_169_cov_0.916667_g8760_i0 PRJNA658591 8823 169 0.916667 1.54916723 Pimephales minnow adintovirus 2609864 Viruses Viruses 71.6 2.4e-13   NR DAC81394.1 2609864 g8760 i0 63 0.958579881656805 54 20 95.9 0 6 167 173 226 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 162 71.6 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
27429282 27429282 PRJNA658591_S_NODE_5043_length_207_cov_0.829114_g4980_i0 PRJNA658591 5043 207 0.829114 1.71626598 Pimephales minnow adintovirus 2609864 Viruses Viruses 88.6 1.4e-19   NR DAC81394.1 2609864 g4980 i0 58.8 0.985507246376812 68 28 98.6 0 4 207 64 131 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 204 88.6 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
28881339 28881339 PRJNA658591_S_NODE_6008_length_194_cov_0.834483_g5945_i0 PRJNA658591 6008 194 0.834483 1.61889702 Pimephales minnow adintovirus 2609864 Viruses Viruses 48.1 1.97e-4   NR DAC81394.1 2609864 g5945 i0 52.9 0.788659793814433 51 24 78.9 0 155 3 7 57 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 153 48.1 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
28976248 28976248 PRJNA658591_S_NODE_6788_length_185_cov_2.286765_g6725_i0 PRJNA658591 6788 185 2.286765 4.23051525 Cotonvirus japonicus 2811091 Viruses Viruses 91.3 5.480000000000001e-21   NR YP_010842158.1 2811091 g6725 i0 70.2 0.924324324324324 57 17 92.4 0 175 5 70 126 YP_010842158.1 hypothetical protein QLL95_gp0573 [Cotonvirus japonicus] diamond 171 91.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Cotonvirus Cotonvirus japonicum
29071060 29071060 PRJNA658591_S_NODE_5448_length_201_cov_1.138158_g5385_i0 PRJNA658591 5448 201 1.138158 2.28769758 Adintovirus bos4377 3115894 Viruses Viruses 58.2 5.12e-8   NR DBA50496.1 3115894 g5385 i0 48.5 0.985074626865672 66 34 98.5 0 199 2 66 131 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 198 58.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
29260102 29260102 PRJNA658591_S_NODE_6009_length_194_cov_0.800000_g5946_i0 PRJNA658591 6009 194 0.8 1.552 Pimephales minnow adintovirus 2609864 Viruses Viruses 57 1.09e-7   NR DAC81394.1 2609864 g5946 i0 48.4 0.989690721649485 64 33 99 0 192 1 64 127 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 192 57 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
30081174 30081174 PRJNA658591_S_NODE_9392_length_166_cov_1.376068_g9329_i0 PRJNA658591 9392 166 1.376068 2.28427288 Adintovirus bos4377 3115894 Viruses Viruses 46.6 5.07e-4   NR DBA50496.1 3115894 g9329 i0 57.4 0.849397590361446 47 20 84.9 0 15 155 112 158 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 141 46.6 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
30429318 30429318 PRJNA658591_S_NODE_11533_length_152_cov_2.281553_g11470_i0 PRJNA658591 11533 152 2.281553 3.46796056 Pimephales minnow adintovirus 2609864 Viruses Viruses 42.4 0.0144   NR DAC81396.1 2609864 g11470 i0 50 0.986842105263158 50 25 98.7 0 1 150 29 78 DAC81396.1 TPA_asm: acintoc2 [Pimephales minnow adintovirus] diamond 150 42.4 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
30618384 30618384 PRJNA658591_S_NODE_5773_length_197_cov_0.878378_g5710_i0 PRJNA658591 5773 197 0.878378 1.73040466 Adintovirus bos4377 3115894 Viruses Viruses 53.1 3.36e-6   NR DBA50496.1 3115894 g5710 i0 48.4 0.974619289340102 64 33 97.5 0 1 192 15 78 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 192 53.1 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
31218431 31218431 PRJNA658591_S_NODE_4855_length_210_cov_1.049689_g4792_i0 PRJNA658591 4855 210 1.049689 2.2043469 Pimephales minnow adintovirus 2609864 Viruses Viruses 79.7 2.33e-17   NR DAC81395.1 2609864 g4792 i0 67.9 0.8 56 18 80 0 42 209 1 56 DAC81395.1 TPA_asm: gasderminX [Pimephales minnow adintovirus] diamond 168 79.7 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
32104501 32104501 PRJNA658591_S_NODE_3638_length_234_cov_3.367568_g3575_i0 PRJNA658591 3638 234 3.367568 7.88010912 Chuvivirus 2842604 Viruses Viruses 51.2 3.29e-5   NR WET19891.1 2842604 g3575 i0 52.4 1.15384615384615 42 20 53.8 0 17 142 456 497 WET19891.1 MAG: nucleoprotein [Sea turtle neural virus 1] diamond 270 51.6 0.992248062015504 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;