RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA658591", tax_phylum = "Uroviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 5 ✖

tax_phylum 1

  • Uroviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA658591 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3176371 3176371 PRJNA658591_S_NODE_7503_length_179_cov_1.115385_g7440_i0 PRJNA658591 7503 179 1.115385 1.99653915 Caudoviricetes sp. 2832643 Viruses Viruses 315 1.75e-81   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g7440 i0 98.324 328.77094972067 179 3 100 0 1 179 17963 18141 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 58850 315 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
13379584 13379584 PRJNA658591_S_NODE_2771_length_259_cov_238.561905_g2708_i0 PRJNA658591 2771 259 238.561905 617.87533395 Tequatrovirus gee9062 2844202 Viruses Viruses 80.5 1.08e-10   NTclustered gi|1595483537|gb|MK327945.1| 2502305 g2708 i0 97.826 0.32046332046332 46 1 18 0 208 253 124000 124045 Escherichia phage vB_EcoM_G4500, complete genome blastn 83 80.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Straboviridae Tequatrovirus Tequatrovirus gee9062
15928398 15928398 PRJNA658591_S_NODE_2553_length_268_cov_7.470320_g2490_i0 PRJNA658591 2553 268 7.47032 20.0204576 Caudoviricetes sp. 2832643 Viruses Viruses 63.9 1.13e-5   NTclustered gi|2059855482|tpg|BK040575.1| 2832643 g2490 i0 97.368 0.261194029850746 38 0 14 1 232 268 42 5 MAG TPA_asm: Caudoviricetes sp. isolate ctwIV1, partial genome blastn 70 63.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21028024 21028024 PRJNA658591_S_NODE_3657_length_233_cov_194.815217_g3594_i0 PRJNA658591 3657 233 194.815217 453.91945561 Klebsiella phage phiKp_32 2979986 Viruses Viruses 108 4.39e-19   NTclustered gi|2507497987|dbj|LC768500.1| 2979986 g3594 i0 94.444 2.1244635193133 72 1 30 2 7 75 1 72 Klebsiella phage phiKp_32 DNA, complete genome blastn 495 108 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Klebsiella phage phiKp_32
22302771 22302771 PRJNA658591_S_NODE_858_length_425_cov_9.031915_g795_i0 PRJNA658591 858 425 9.031915 38.38563875 Achromobacter phage tuull 3074846 Viruses Viruses 69.4 4.07e-7   NTclustered gi|2618964722|gb|OR396896.1| 3074846 g795 i0 100 0.0870588235294118 37 0 9 0 9 45 36628 36664 Achromobacter phage tuull, partial genome blastn 37 69.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Achromobacter phage tuull

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;