RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA658591" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA658591 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17203479 17203479 PRJNA658591_S_NODE_6574_length_187_cov_4.579710_g6511_i0 PRJNA658591 6574 187 4.57971 8.5640577 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 63.9 7.39e-6   NTclustered gi|2609791700|gb|OR652422.1| 10376 g6511 i0 100 0.53475935828877 34 0 18 0 154 187 9243 9276 Human gammaherpesvirus 4 strain 725, partial genome blastn 100 63.9 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
24851735 24851735 PRJNA658591_S_NODE_6380_length_189_cov_3.271429_g6317_i0 PRJNA658591 6380 189 3.271429 6.18300081 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.001   NTclustered gi|1465382783|emb|LS992247.1| 10376 g6317 i0 97.059 0.35978835978836 34 0 17 1 1 33 58024 58057 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 68 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;