RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA658591" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA658591 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5728923 5728923 PRJNA658591_S_NODE_2845_length_257_cov_2.192308_g2782_i0 PRJNA658591 2845 257 2.192308 5.63423156 Cokeromyces recurvatus 90255 Fungi Fungi 174 4.78e-39   NTclustered gi|2324086751|ref|XM_051529893.1| 90255 g2782 i0 79.835 28.2607003891051 243 45 94 4 15 255 1539 1299 Cokeromyces recurvatus V-type proton ATPase catalytic subunit A (BX663DRAFT_526377), mRNA blastn 7263 174 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
8278751 8278751 PRJNA658591_S_NODE_8447_length_171_cov_2.942623_g8384_i0 PRJNA658591 8447 171 2.942623 5.03188533 Mycotypha africana 64632 Fungi Fungi 183 4.869999999999999e-42   NTclustered gi|2432570701|ref|XM_053083359.1| 64632 g8384 i0 85.965 52.625730994152 171 24 100 0 1 171 1141 971 Mycotypha africana V-type proton ATPase catalytic subunit A (BDF20DRAFT_907251), partial mRNA blastn 8999 183 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
18477776 18477776 PRJNA658591_S_NODE_3395_length_240_cov_1.884817_g3332_i0 PRJNA658591 3395 240 1.884817 4.5235608 Gilbertella persicaria 101096 Fungi Fungi 54.7 0.006   NTclustered gi|2323760233|ref|XM_051583203.1| 101096 g3332 i0 96.875 0.25 32 1 13 0 24 55 1649 1618 Gilbertella persicaria uncharacterized protein (B0P05DRAFT_599395), mRNA blastn 60 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;