RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA658591" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA658591 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
625465 625465 PRJNA658591_S_NODE_10121_length_163_cov_0.912281_g10058_i0 PRJNA658591 10121 163 0.912281 1.48701803 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.004   NTclustered gi|2912997258|dbj|AP039602.1| 145626 g10058 i0 96.875 0.196319018404908 32 1 20 0 43 74 16864439 16864470 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 21, sequence blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
7004074 7004074 PRJNA658591_S_NODE_1406_length_348_cov_1.665552_g1343_i0 PRJNA658591 1406 348 1.665552 5.79612096 Conus episcopatus 88764 Mollusca Mollusca 108 6.94e-19   NTclustered gi|920148880|dbj|AK443485.1| 88764 g1343 i0 91.463 0.71264367816092 82 2 22 4 1 77 30 111 Conus episcopatus mRNA, sequence id; Ep642-SF13 blastn 248 108 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neogastropoda Conidae Conus Conus episcopatus
17203467 17203467 PRJNA658591_S_NODE_3494_length_237_cov_5.377660_g3431_i0 PRJNA658591 3494 237 5.37766 12.7450542 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.006   NTclustered gi|2913000417|dbj|AP039607.1| 145626 g3431 i0 96.875 0.270042194092827 32 1 14 0 185 216 8068705 8068736 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 26, sequence blastn 64 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
18477781 18477781 PRJNA658591_S_NODE_5155_length_205_cov_1.948718_g5092_i0 PRJNA658591 5155 205 1.948718 3.9948719 Bradybaena similaris 145626 Mollusca Mollusca 54.7 0.005   NTclustered gi|2913001038|dbj|AP039608.1| 145626 g5092 i0 100 0.141463414634146 29 0 14 0 143 171 9147465 9147493 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 27, sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
27946424 27946424 PRJNA658591_S_NODE_2645_length_265_cov_1.203704_g2582_i0 PRJNA658591 2645 265 1.203704 3.1898156 Opisthokonta 33154 Mollusca Mollusca 168 1.9699999999999998e-47   NR XP_013067712.1 6526 g2582 i0 90.9 173.28679245283 88 8 99.6 0 264 1 396 483 XP_013067712.1 propionyl-CoA carboxylase beta chain, mitochondrial-like [Biomphalaria glabrata] diamond 45921 169 0.994082840236686 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
31389340 31389340 PRJNA658591_S_NODE_6156_length_192_cov_1.000000_g6093_i0 PRJNA658591 6156 192 1 1.92 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.4 3e-5   NR CAG5129096.1 100452 g6093 i0 46.3 6.328125 54 29 84.4 0 17 178 109 162 CAG5129096.1 unnamed protein product [Candidula unifasciata] diamond 1215 50.8 0.992125984251969 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata
32148455 32148455 PRJNA658591_S_NODE_4778_length_211_cov_1.567901_g4715_i0 PRJNA658591 4778 211 1.567901 3.30827111 Mollusca 6447 Mollusca Mollusca 67.4 5.02e-11   NR XP_021377987.1 6573 g4715 i0 59.1 5.53080568720379 44 18 62.6 0 2 133 636 679 XP_021377987.1 digestive organ expansion factor homolog isoform X1 [Mizuhopecten yessoensis] diamond 1167 67.8 0.994100294985251 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;