contig_metadata
10 rows where bioproject = "PRJNA658591" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13915416 | 13915416 | PRJNA658591_S_NODE_6511_length_188_cov_1.496403_g6448_i0 | PRJNA658591 | 6511 | 188 | 1.496403 | 2.81323764 | Cheloniidae | 8465 | Chordata | Chordata | 52.8 | 0.016 | NTclustered | gi|2911500576|emb|OZ223607.1| | 8472 | g6448 | i0 | 100 | 0.446808510638298 | 28 | 0 | 15 | 0 | 2 | 29 | 10181279 | 10181252 | Lepidochelys kempii isolate rLepKem1 genome assembly, chromosome: 21 | blastn | 84 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Testudines | Cheloniidae | Lepidochelys | Lepidochelys kempii | ||
| 18477774 | 18477774 | PRJNA658591_S_NODE_2235_length_284_cov_5.519149_g2172_i0 | PRJNA658591 | 2235 | 284 | 5.519149 | 15.67438316 | Vicugna pacos | 30538 | Chordata | Chordata | 52.8 | 0.026 | NTclustered | gi|1777469384|ref|XR_004190006.1| | 30538 | g2172 | i0 | 100 | 0.0985915492957746 | 28 | 0 | 10 | 0 | 242 | 269 | 689 | 716 | PREDICTED: Vicugna pacos uncharacterized LOC116280604 (LOC116280604), ncRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Camelidae | Vicugna | Vicugna pacos | |
| 18477786 | 18477786 | PRJNA658591_S_NODE_6435_length_189_cov_1.114286_g6372_i0 | PRJNA658591 | 6435 | 189 | 1.114286 | 2.10600054 | Mus caroli | 10089 | Chordata | Chordata | 56.5 | 0.001 | NTclustered | gi|1679855561|ref|XM_029480371.1| | 10089 | g6372 | i0 | 100 | 0.317460317460317 | 30 | 0 | 16 | 0 | 44 | 73 | 1858 | 1887 | PREDICTED: Mus caroli CYLD lysine 63 deubiquitinase (Cyld), transcript variant X2, mRNA | blastn | 60 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 18477795 | 18477795 | PRJNA658591_S_NODE_815_length_433_cov_4.531250_g752_i0 | PRJNA658591 | 815 | 433 | 4.53125 | 19.6203125 | Spinus spinus | 160760 | Chordata | Chordata | 54.7 | 0.012 | NTclustered | gi|2917663466|emb|OZ228753.1| | 160760 | g752 | i0 | 94.444 | 0.166281755196305 | 36 | 1 | 8 | 1 | 156 | 190 | 37205122 | 37205157 | Spinus spinus genome assembly, chromosome: 5 | blastn | 72 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Fringillidae | Spinus | Spinus spinus | |
| 24113355 | 24113355 | PRJNA658591_S_NODE_8579_length_170_cov_2.760331_g8516_i0 | PRJNA658591 | 8579 | 170 | 2.760331 | 4.6925627 | Mammalia | 40674 | Chordata | Chordata | 158 | 2.93e-34 | NTclustered | gi|2806545747|ref|XM_068562404.1| | 9764 | g8516 | i0 | 83.432 | 79.7882352941176 | 169 | 28 | 99 | 0 | 1 | 169 | 1107 | 1275 | PREDICTED: Eschrichtius robustus ATP synthase F1 subunit alpha (ATP5F1A), mRNA | blastn | 13564 | 158 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Eschrichtiidae | Eschrichtius | Eschrichtius robustus | |
| 30598964 | 30598964 | PRJNA658591_S_NODE_2513_length_270_cov_2.932127_g2450_i0 | PRJNA658591 | 2513 | 270 | 2.932127 | 7.9167429 | root | 1 | Root_unresolved | Root_unresolved | 107 | 2.45e-26 | NR | XP_051712873.2 | 9986 | g2450 | i0 | 64.8 | 37.8888888888889 | 88 | 27 | 95.6 | 2 | 12 | 269 | 111 | 196 | XP_051712873.2 large ribosomal subunit protein eL22 isoform X2 [Oryctolagus cuniculus] | diamond | 10230 | 107 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Lagomorpha | Leporidae | Oryctolagus | Oryctolagus cuniculus | |
| 30618386 | 30618386 | PRJNA658591_S_NODE_8853_length_169_cov_0.866667_g8790_i0 | PRJNA658591 | 8853 | 169 | 0.866667 | 1.46466723 | Ranitomeya imitator | 111125 | Chordata | Chordata | 59.7 | 9.52e-10 | NR | XP_069586114.1 | 111125 | g8790 | i0 | 51.9 | 0.958579881656805 | 54 | 23 | 95.9 | 1 | 164 | 3 | 22 | 72 | XP_069586114.1 COX assembly mitochondrial protein homolog [Ranitomeya imitator] | diamond | 162 | 59.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Dendrobatidae | Ranitomeya | Ranitomeya imitator | |
| 31123672 | 31123672 | PRJNA658591_S_NODE_5575_length_199_cov_2.193333_g5512_i0 | PRJNA658591 | 5575 | 199 | 2.193333 | 4.36473267 | Ciona intestinalis | 7719 | Chordata | Chordata | 70.9 | 2.55e-12 | NR | XP_002120963.1 | 7719 | g5512 | i0 | 60 | 0.678391959798995 | 45 | 18 | 67.8 | 0 | 34 | 168 | 565 | 609 | XP_002120963.1 alpha-amylase 2-like [Ciona intestinalis] | diamond | 135 | 70.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Ascidiacea | Phlebobranchia | Cionidae | Ciona | Ciona intestinalis | |
| 31325871 | 31325871 | PRJNA658591_S_NODE_7015_length_183_cov_1.216418_g6952_i0 | PRJNA658591 | 7015 | 183 | 1.216418 | 2.22604494 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 97.1 | 1.85e-24 | NR | XP_053557215.1 | 8345 | g6952 | i0 | 78.3 | 3.91803278688525 | 60 | 13 | 98.4 | 0 | 2 | 181 | 5 | 64 | XP_053557215.1 succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial-like [Bombina bombina] | diamond | 717 | 97.8 | 0.992842535787321 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Bombinatoridae | Bombina | Bombina bombina | |
| 32009648 | 32009648 | PRJNA658591_S_NODE_6498_length_188_cov_2.230216_g6435_i0 | PRJNA658591 | 6498 | 188 | 2.230216 | 4.19280608 | Erpetoichthys calabaricus | 27687 | Chordata | Chordata | 66.6 | 5.46e-11 | NR | XP_051791274.1 | 27687 | g6435 | i0 | 71.4 | 4.69148936170213 | 49 | 13 | 76.6 | 1 | 167 | 24 | 156 | 204 | XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] | diamond | 882 | 67 | 0.994029850746269 | Eukaryota | Opisthokonta | Metazoa | Chordata | Cladistia | Polypteriformes | Polypteridae | Erpetoichthys | Erpetoichthys calabaricus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;