RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA658591" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA658591 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30586737 30586737 PRJNA658591_S_NODE_5093_length_206_cov_2.292994_g5030_i0 PRJNA658591 5093 206 2.292994 4.72356764 Anaerolineales bacterium 2073117 Bacteria Bacteria 66.6 8.67e-11   NR HND47414.1 2073117 g5030 i0 56.5 0.902912621359223 62 27 90.3 0 202 17 652 713 HND47414.1 hypothetical protein [Anaerolineales bacterium] diamond 186 66.6 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30966216 30966216 PRJNA658591_S_NODE_10034_length_163_cov_1.596491_g9971_i0 PRJNA658591 10034 163 1.596491 2.60228033 uncultured Chloroflexota bacterium 166587 Bacteria Bacteria 43.1 0.00901   NR CAA9302627.1 166587 g9971 i0 44.2 0.791411042944785 43 21 79.1 1 21 149 304 343 CAA9302627.1 MAG: hypothetical protein AVDCRST_MAG77-5794 [uncultured Chloroflexota bacterium] diamond 129 43.1 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;