RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where bioproject = "PRJNA658591" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 15 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA658591 · 15 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1901647 1901647 PRJNA658591_S_NODE_10022_length_163_cov_1.719298_g9959_i0 PRJNA658591 10022 163 1.719298 2.80245574 Kneiffiella pilaecystidiata 2530210 Fungi Fungi 291 2.64e-74   NTclustered gi|2316022357|gb|OP620789.1| 2530210 g9959 i0 98.773 105.975460122699 163 2 100 0 1 163 2335 2173 Kneiffiella pilaecystidiata voucher Helo_1517 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17274 291 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales   Kneiffiella Kneiffiella pilaecystidiata
5728920 5728920 PRJNA658591_S_NODE_2165_length_288_cov_1.715481_g2102_i0 PRJNA658591 2165 288 1.715481 4.94058528 Malassezia restricta 76775 Fungi Fungi 494 3.68e-135   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g2102 i0 97.578 80.8090277777778 289 6 100 1 1 288 3271 2983 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 23273 494 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
5728927 5728927 PRJNA658591_S_NODE_3845_length_229_cov_1.355556_g3782_i0 PRJNA658591 3845 229 1.355556 3.10422324 Malassezia restricta 76775 Fungi Fungi 416 6.289999999999999e-112   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g3782 i0 99.563 92.8602620087336 229 0 100 1 1 229 1520 1747 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 21265 416 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
7004075 7004075 PRJNA658591_S_NODE_1566_length_330_cov_4.224199_g1503_i0 PRJNA658591 1566 330 4.224199 13.9398567 Dioszegia hungarica 4972 Fungi Fungi 599 8.849999999999995e-167   NTclustered gi|2432175759|ref|XR_008288897.1| 4972 g1503 i0 99.394 137.993939393939 330 2 100 0 1 330 1641 1312 Dioszegia hungarica 25S ribosomal RNA (MKK02DRAFT_277614), rRNA blastn 45538 599 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
7539309 7539309 PRJNA658591_S_NODE_10086_length_163_cov_0.912281_g10023_i0 PRJNA658591 10086 163 0.912281 1.48701803 Malassezia 55193 Fungi Fungi 296 5.68e-76   NTclustered gi|398360769|gb|JX132826.1| 338567 g10023 i0 99.39 101.993865030675 164 0 100 1 1 163 165 2 Uncultured Malassezia clone CEas161 26S ribosomal RNA gene, partial sequence blastn 16625 296 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae   uncultured Malassezia
8814381 8814381 PRJNA658591_S_NODE_8867_length_168_cov_28.882353_g8804_i0 PRJNA658591 8867 168 28.882353 48.52235304 Eukaryota 2759 Fungi Fungi 307 2.73e-79   NTclustered gi|2558627581|gb|OR405830.1| 76775 g8804 i0 100 100.785714285714 166 0 99 0 3 168 495 330 Malassezia restricta strain GSVCC20Z3-2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 16932 307 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
12640594 12640594 PRJNA658591_S_NODE_1990_length_298_cov_4.297189_g1927_i0 PRJNA658591 1990 298 4.297189 12.80562322 Dioszegia 165440 Fungi Fungi 414 3.07e-111   NTclustered gi|98991732|gb|DQ513276.1| 4974 g1927 i0 95.367 86.9597315436242 259 12 87 0 40 298 362 104 Dioszegia crocea strain CRUB 1279 26S ribosomal RNA gene, partial sequence blastn 25914 414 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia crocea
14654434 14654434 PRJNA658591_S_NODE_6772_length_185_cov_3.441176_g6709_i0 PRJNA658591 6772 185 3.441176 6.3661756 Dioszegia hungarica 4972 Fungi Fungi 324 3.03e-84   NTclustered gi|2432175759|ref|XR_008288897.1| 4972 g6709 i0 98.37 113.324324324324 184 3 99 0 1 184 1943 2126 Dioszegia hungarica 25S ribosomal RNA (MKK02DRAFT_277614), rRNA blastn 20965 324 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
18477787 18477787 PRJNA658591_S_NODE_6475_length_188_cov_5.223022_g6412_i0 PRJNA658591 6475 188 5.223022 9.81928136 uncultured Agaricomycetidae 585505 Fungi Fungi 331 1.85e-86   NTclustered gi|219812624|gb|FJ552838.1| 585505 g6412 i0 98.404 100.106382978723 188 3 100 0 1 188 1 188 Uncultured Agaricomycetidae clone LTSP_EUKA_P1H12 18S ribosomal RNA, 18S-25/28S ribosomal RNA intergenic spacer, partial sequence blastn 18820 331 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes       uncultured Agaricomycetidae
19012937 19012937 PRJNA658591_S_NODE_11695_length_150_cov_4.029703_g11632_i0 PRJNA658591 11695 150 4.029703 6.0445545 Fungi 4751 Fungi Fungi 276 6.660000000000001e-70   NTclustered gi|1497815244|ref|NG_062030.1| 4973 g11632 i0 100 99.3333333333333 149 0 99 0 1 149 909 761 Dioszegia aurantiaca JCM 2956 18S rRNA gene, partial sequence; from TYPE material blastn 14900 276 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia aurantiaca
19012946 19012946 PRJNA658591_S_NODE_5815_length_196_cov_3.292517_g5752_i0 PRJNA658591 5815 196 3.292517 6.45333332 Microbotryomycetes 162481 Fungi Fungi 195 2.66e-45   NTclustered gi|1358186634|gb|MH047191.1| 5278 g5752 i0 89.103 62.5357142857143 156 17 80 0 29 184 3878 4033 Leucosporidium scottii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12257 195 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium scottii
19752483 19752483 PRJNA658591_S_NODE_1636_length_324_cov_4.516364_g1573_i0 PRJNA658591 1636 324 4.516364 14.63301936 Dioszegia hungarica 4972 Fungi Fungi 536 6.889999999999998e-148   NTclustered gi|2432175759|ref|XR_008288897.1| 4972 g1573 i0 96.605 139.450617283951 324 9 99 2 1 323 3063 3385 Dioszegia hungarica 25S ribosomal RNA (MKK02DRAFT_277614), rRNA blastn 45182 536 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
20287742 20287742 PRJNA658591_S_NODE_2796_length_259_cov_1.347619_g2733_i0 PRJNA658591 2796 259 1.347619 3.49033321 Polyporaceae 5317 Fungi Fungi 363 9.589999999999999e-96   NTclustered gi|77379308|gb|DQ208413.1| 5315 g2733 i0 91.923 104.200772200772 260 19 100 2 1 259 1846 1588 Ganoderma lucidum strain C-2 large subunit ribosomal RNA gene, partial sequence blastn 26988 363 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma lucidum
22302757 22302757 PRJNA658591_S_NODE_3458_length_238_cov_1.777778_g3395_i0 PRJNA658591 3458 238 1.777778 4.23111164 Dioszegia hungarica 4972 Fungi Fungi 440 3.899999999999999e-119   NTclustered gi|2432175759|ref|XR_008288897.1| 4972 g3395 i0 100 147.40756302521 238 0 100 0 1 238 1594 1831 Dioszegia hungarica 25S ribosomal RNA (MKK02DRAFT_277614), rRNA blastn 35083 440 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
23578136 23578136 PRJNA658591_S_NODE_4899_length_209_cov_1.900000_g4836_i0 PRJNA658591 4899 209 1.9 3.971 Exobasidium vaccinii 5407 Fungi Fungi 298 2.13e-76   NTclustered gi|501438071|gb|FJ644526.2| 5407 g4836 i0 92.344 22.6650717703349 209 16 100 0 1 209 1971 2179 Exobasidium vaccinii voucher TUB 019109 28S ribosomal RNA gene, partial sequence blastn 4737 298 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Exobasidiales Exobasidiaceae Exobasidium Exobasidium vaccinii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;