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contig_metadata

23 rows where bioproject = "PRJNA658591" and tax_phylum = "Bacteroidota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA658591 · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1161375 1161375 PRJNA658591_S_NODE_8801_length_169_cov_1.216667_g8738_i0 PRJNA658591 8801 169 1.216667 2.05616723 root 1 Root_unresolved Root_unresolved 313 5.859999999999999e-81   NTclustered gi|2850837537|gb|PQ578042.1| 239 g8738 i0 100 105.988165680473 169 0 100 0 1 169 1268 1100 Flavobacterium sp. strain TBRC 19031 16S ribosomal RNA gene, partial sequence blastn 17912 313 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
1901652 1901652 PRJNA658591_S_NODE_2422_length_274_cov_5.604444_g2359_i0 PRJNA658591 2422 274 5.604444 15.35617656 Flavobacterium mekongense 3379707 Bacteria Bacteria 507 4.47e-139   NTclustered gi|2892685955|gb|CP174374.1| 3379707 g2359 i0 100 478.412408759124 274 0 100 0 1 274 1249674 1249401 Flavobacterium sp. TBRC 19031 chromosome, complete genome blastn 131085 507 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium mekongense
5728918 5728918 PRJNA658591_S_NODE_1805_length_311_cov_2.683206_g1742_i0 PRJNA658591 1805 311 2.683206 8.34477066 Bacteroidota 976 Bacteria Bacteria 115 3.27e-27   NR MBI1343465.1 1914338 g1742 i0 62.5 10.8906752411576 88 26 84.9 1 310 47 835 915 MBI1343465.1 pyruvate, phosphate dikinase [Terrimonas sp.] diamond 3387 116 0.991379310344828 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Terrimonas Terrimonas sp.
5728942 5728942 PRJNA658591_S_NODE_8645_length_170_cov_1.289256_g8582_i0 PRJNA658591 8645 170 1.289256 2.1917352 Cloacibacterium caeni 2004710 Bacteria Bacteria 315 1.64e-81   NTclustered gi|2040340748|emb|OU015321.1| 2004710 g8582 i0 100 401.994117647059 170 0 100 0 1 170 1872413 1872244 Cloacibacterium caeni isolate Isolate2 genome assembly, chromosome: 1 blastn 68339 315 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium caeni
7539310 7539310 PRJNA658591_S_NODE_10546_length_160_cov_3.504505_g10483_i0 PRJNA658591 10546 160 3.504505 5.607208 Flavobacterium 237 Bacteria Bacteria 296 5.55e-76   NTclustered gi|2892685955|gb|CP174374.1| 3379707 g10483 i0 100 529.275 160 0 100 0 1 160 1249807 1249648 Flavobacterium sp. TBRC 19031 chromosome, complete genome blastn 84684 296 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium mekongense
8278714 8278714 PRJNA658591_S_NODE_11007_length_156_cov_2.915888_g10944_i0 PRJNA658591 11007 156 2.915888 4.54878528 Bacteroidota 976 Bacteria Bacteria 116 2.78e-29   NR MBU7570240.1 239 g10944 i0 96.1 7.84615384615385 51 2 98.1 0 3 155 362 412 MBU7570240.1 aldehyde dehydrogenase family protein [Flavobacterium sp.] diamond 1224 116 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
8278724 8278724 PRJNA658591_S_NODE_2507_length_270_cov_8.085973_g2444_i0 PRJNA658591 2507 270 8.085973 21.8321271 Bacteroidota 976 Bacteria Bacteria 151 2.1799999999999996e-41   NR WP_184625254.1 188932 g2444 i0 80.7 24.4888888888889 88 17 97.8 0 265 2 341 428 WP_184625254.1 aldehyde dehydrogenase family protein [Pedobacter cryoconitis] diamond 6612 151 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter cryoconitis
8278753 8278753 PRJNA658591_S_NODE_8967_length_168_cov_1.638655_g8904_i0 PRJNA658591 8967 168 1.638655 2.7529404 Sediminibacterium sp. KACHI17 1751071 Bacteria Bacteria 283 4.6e-72   NTclustered gi|2690291631|dbj|AP029612.1| 1751071 g8904 i0 97.024 85.7440476190476 168 5 100 0 1 168 2978001 2977834 Sediminibacterium sp. KACHI17 DNA, complete genome blastn 14405 283 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Sediminibacterium Sediminibacterium sp. KACHI17
13379589 13379589 PRJNA658591_S_NODE_4291_length_219_cov_7.370588_g4228_i0 PRJNA658591 4291 219 7.370588 16.14158772 Flavobacterium sp. TBRC 19032 3379707 Bacteria Bacteria 388 1.3e-103   NTclustered gi|2892685960|gb|CP174373.1| 3379708 g4228 i0 98.63 540.269406392694 219 3 100 0 1 219 1283009 1283227 Flavobacterium sp. TBRC 19032 chromosome, complete genome blastn 118319 388 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. TBRC 19032
15928417 15928417 PRJNA658591_S_NODE_7813_length_176_cov_2.598425_g7750_i0 PRJNA658591 7813 176 2.598425 4.573228 Sediminibacterium sp. KACHI17 1751071 Bacteria Bacteria 267 4.8699999999999996e-67   NTclustered gi|2690291631|dbj|AP029612.1| 1751071 g7750 i0 98.667 227.630681818182 150 2 85 0 27 176 2978466 2978317 Sediminibacterium sp. KACHI17 DNA, complete genome blastn 40063 267 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Sediminibacterium Sediminibacterium sp. KACHI17
21563370 21563370 PRJNA658591_S_NODE_7457_length_179_cov_2.269231_g7394_i0 PRJNA658591 7457 179 2.269231 4.06192349 Flavobacterium 237 Bacteria Bacteria 331 1.74e-86   NTclustered gi|2892685955|gb|CP174374.1| 3379707 g7394 i0 100 463.765363128492 179 0 100 0 1 179 1250100 1249922 Flavobacterium sp. TBRC 19031 chromosome, complete genome blastn 83014 331 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium mekongense
26923218 26923218 PRJNA658591_S_NODE_1862_length_307_cov_2.372093_g1799_i0 PRJNA658591 1862 307 2.372093 7.28232551 Flammeovirgaceae bacterium 2026740 Bacteria Bacteria 102 8.13e-26   NR MFM7852277.1 2026740 g1799 i0 54.7 0.840390879478827 86 27 84 1 32 289 1 74 MFM7852277.1 transglycosylase SLT domain-containing protein [Flammeovirgaceae bacterium] diamond 258 102 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flammeovirgaceae   Flammeovirgaceae bacterium
26954634 26954634 PRJNA658591_S_NODE_1102_length_385_cov_6.458333_g1039_i0 PRJNA658591 1102 385 6.458333 24.86458205 Bacteroidota bacterium 1898104 Bacteria Bacteria 130 2.45e-32   NR MEY4860558.1 1898104 g1039 i0 49.2 0.981818181818182 126 63 97.4 1 380 6 500 625 MEY4860558.1 hypothetical protein [Bacteroidota bacterium] diamond 378 130 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27409862 27409862 PRJNA658591_S_NODE_8463_length_171_cov_2.352459_g8400_i0 PRJNA658591 8463 171 2.352459 4.02270489 Pseudomonadati 3379134 Bacteria Bacteria 72 6.54e-13   NR QQS51403.1 1898104 g8400 i0 63.6 5.87719298245614 55 20 96.5 0 5 169 206 260 QQS51403.1 MAG: NADP-dependent isocitrate dehydrogenase [Bacteroidota bacterium] diamond 1005 72 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27776504 27776504 PRJNA658591_S_NODE_4424_length_217_cov_3.345238_g4361_i0 PRJNA658591 4424 217 3.345238 7.25916646 Sediminibacterium sp. 1917865 Bacteria Bacteria 80.9 9.93e-16   NR MCW3087753.1 1917865 g4361 i0 54.2 2.98617511520737 72 33 99.5 0 216 1 433 504 MCW3087753.1 glycine dehydrogenase [Sediminibacterium sp.] diamond 648 80.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Sediminibacterium Sediminibacterium sp.
28186558 28186558 PRJNA658591_S_NODE_2066_length_293_cov_7.122951_g2003_i0 PRJNA658591 2066 293 7.122951 20.87024643 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 124 1.11e-30   NR HNA14825.1 2099675 g2003 i0 59.1 0.95221843003413 93 38 95.2 0 293 15 1536 1628 HNA14825.1 reverse transcriptase domain-containing protein [Cyclobacteriaceae bacterium] diamond 279 124 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
28471096 28471096 PRJNA658591_S_NODE_8706_length_169_cov_4.266667_g8643_i0 PRJNA658591 8706 169 4.266667 7.21066723 Dyadobacter psychrotolerans 2541721 Bacteria Bacteria 89 3.16e-19   NR WP_131959455.1 2541721 g8643 i0 73.2 2.98224852071006 56 15 99.4 0 2 169 132 187 WP_131959455.1 NAD(P)-dependent alcohol dehydrogenase [Dyadobacter psychrotolerans] diamond 504 89 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Dyadobacter Dyadobacter psychrotolerans
29272317 29272317 PRJNA658591_S_NODE_6489_length_188_cov_2.733813_g6426_i0 PRJNA658591 6489 188 2.733813 5.13956844 Bacteroidota 976 Bacteria Bacteria 113 1.72e-27   NR WP_012779691.1 94254 g6426 i0 85.5 12.8617021276596 62 9 98.9 0 2 187 267 328 WP_012779691.1 aldehyde dehydrogenase family protein [Dyadobacter fermentans] diamond 2418 114 0.991228070175439 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Dyadobacter Dyadobacter fermentans
29765343 29765343 PRJNA658591_S_NODE_4391_length_218_cov_1.076923_g4328_i0 PRJNA658591 4391 218 1.076923 2.34769214 Bacteroidales bacterium 2030927 Bacteria Bacteria 116 2e-29   NR MFO7939826.1 2030927 g4328 i0 75 3.94954128440367 72 18 99.1 0 216 1 251 322 MFO7939826.1 GMP reductase [Bacteroidales bacterium] diamond 861 116 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
30144206 30144206 PRJNA658591_S_NODE_3192_length_245_cov_4.464286_g3129_i0 PRJNA658591 3192 245 4.464286 10.9375007 Fluviicola sp. 1917219 Bacteria Bacteria 107 2.43e-25   NR MBL1279618.1 1917219 g3129 i0 59.5 3.90612244897959 79 31 96.7 1 8 244 156 233 MBL1279618.1 acetyl-CoA C-acyltransferase [Fluviicola sp.] diamond 957 107 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Crocinitomicaceae Fluviicola Fluviicola sp.
30188270 30188270 PRJNA658591_S_NODE_1072_length_389_cov_4.108824_g1009_i0 PRJNA658591 1072 389 4.108824 15.98332536 Bacteria 2 Bacteria Bacteria 160 1.54e-42   NR MEY4860637.1 1898104 g1009 i0 58.1 1.98971722365039 129 53 99.5 1 3 389 26 153 MEY4860637.1 hypothetical protein [Bacteroidota bacterium] diamond 774 160 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
32009649 32009649 PRJNA658591_S_NODE_978_length_404_cov_8.712676_g915_i0 PRJNA658591 978 404 8.712676 35.19921104 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 185 3.42e-51   NR HNA14825.1 2099675 g915 i0 67.9 0.995049504950495 134 43 99.5 0 1 402 1409 1542 HNA14825.1 reverse transcriptase domain-containing protein [Cyclobacteriaceae bacterium] diamond 402 185 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
32452854 32452854 PRJNA658591_S_NODE_9659_length_165_cov_0.896552_g9596_i0 PRJNA658591 9659 165 0.896552 1.4793108 Mucilaginibacter arboris 2682090 Bacteria Bacteria 53.9 1.52e-6   NR WP_157567582.1 2682090 g9596 i0 47.1 1.85454545454545 51 27 92.7 0 153 1 662 712 WP_157567582.1 non-ribosomal peptide synthetase [Mucilaginibacter arboris] diamond 306 53.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Mucilaginibacter Mucilaginibacter arboris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;