RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA658591", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA658591 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14654432 14654432 PRJNA658591_S_NODE_6292_length_190_cov_3.588652_g6229_i0 PRJNA658591 6292 190 3.588652 6.8184388 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 145 2.6199999999999997e-30   NTclustered gi|1752383405|ref|XM_030994818.1| 7668 g6229 i0 92.929 58.5736842105263 99 7 52 0 1 99 1234 1332 PREDICTED: Strongylocentrotus purpuratus tubulin alpha-1 chain-like (LOC115918924), mRNA blastn 11129 145 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
28471092 28471092 PRJNA658591_S_NODE_3506_length_237_cov_2.446809_g3443_i0 PRJNA658591 3506 237 2.446809 5.79893733 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 41.2 0.0349   NR KAJ8043773.1 206669 g3443 i0 55.6 0.455696202531646 36 16 45.6 0 231 124 64 99 KAJ8043773.1 hypothetical protein HOLleu_11030 [Holothuria leucospilota] diamond 108 41.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;