RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA658591", tax_kingdom = "Metazoa" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 1 ✖

tax_kingdom 1

  • Metazoa · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA658591 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22302763 22302763 PRJNA658591_S_NODE_5038_length_207_cov_1.018987_g4975_i0 PRJNA658591 5038 207 1.018987 2.10930309 Membranipora membranacea 95170 Bryozoa other_Eukaryota 183 6.16e-42   NTclustered gi|2320635327|gb|ON868448.1| 95170 g4975 i0 89.116 9.32367149758454 147 16 71 0 50 196 137 283 Membranipora membranacea calmodulin-like protein 2 mRNA, complete cds blastn 1930 183 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;