RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA658591", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA658591 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8278754 8278754 PRJNA658591_S_NODE_927_length_413_cov_2.271978_g864_i0 PRJNA658591 927 413 2.271978 9.38326914 Eukaryota 2759 Fungi Fungi 212 4.32e-68   NR KAJ1676764.1 68401 g864 i0 73.9 18.6682808716707 138 33 98.8 2 5 412 9 145 KAJ1676764.1 Peptidyl-prolyl cis-trans isomerase 7, partial [Spiromyces aspiralis] diamond 7710 213 0.995305164319249 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis
11364853 11364853 PRJNA658591_S_NODE_9649_length_165_cov_0.896552_g9586_i0 PRJNA658591 9649 165 0.896552 1.4793108 Mycoemilia scoparia 417184 Fungi Fungi 60.1 9.67e-9   NR KAJ1911557.1 417184 g9586 i0 60.8 4.76363636363636 51 19 92.7 1 2 154 426 475 KAJ1911557.1 ATP-dependent RNA helicase [Mycoemilia scoparia] diamond 786 60.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Mycoemilia Mycoemilia scoparia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;