RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA658591", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA658591 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28881340 28881340 PRJNA658591_S_NODE_7328_length_180_cov_2.541985_g7265_i0 PRJNA658591 7328 180 2.541985 4.575573 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 59.3 2.27e-8   NR CAF1372845.1 392030 g7265 i0 63.6 2.2 33 12 55 0 180 82 259 291 CAF1372845.1 unnamed protein product [Rotaria magnacalcarata] diamond 396 59.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
29165797 29165797 PRJNA658591_S_NODE_10349_length_162_cov_0.920354_g10286_i0 PRJNA658591 10349 162 0.920354 1.49097348 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 67.8 4.86e-13   NR CAF3891063.1 1234261 g10286 i0 67.4 4.2962962962963 43 13 79.6 1 2 130 32 73 CAF3891063.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 696 67.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
30851832 30851832 PRJNA658591_S_NODE_7354_length_180_cov_1.618321_g7291_i0 PRJNA658591 7354 180 1.618321 2.9129778 Opisthokonta 33154 Rotifera other_Eukaryota 43.5 0.00863   NR CAF4902013.1 2762511 g7291 i0 47.9 3.53333333333333 48 16 80 1 180 37 266 304 CAF4902013.1 unnamed protein product, partial [Rotaria sp. Silwood1] diamond 636 43.9 0.990888382687927 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;