RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA657860", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA657860 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9553991 9553991 PRJNA657860_P_NODE_1308_length_286_cov_0.927711_g1252_i0 PRJNA657860 1308 286 0.927711 2.65325346 Parvicapsula sp. SPS-2018 2806882 Cnidaria other_Eukaryota 117 9.24e-22   NTclustered gi|1444845538|gb|MH729074.1| 2806882 g1252 i0 86.792 3.66783216783217 106 12 37 2 178 283 1871 1974 Parvicapsula sp. SPS-2018 isolate JejuCJGd-2018 large subunit ribosomal RNA gene, partial sequence blastn 1049 117 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula sp. SPS-2018
31281968 31281968 PRJNA657860_P_NODE_1275_length_292_cov_1.494118_g1219_i0 PRJNA657860 1275 292 1.494118 4.36282456 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 127 9.1e-32   NR XP_066925207.1 252671 g1219 i0 60.4 5.9486301369863 96 38 98.6 0 1 288 549 644 XP_066925207.1 uncharacterized protein [Clytia hemisphaerica] diamond 1737 128 0.9921875 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;