contig_metadata
12 rows where bioproject = "PRJNA657343" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18475458 | 18475458 | PRJNA657343_P_NODE_43635_length_162_cov_3.070796_g43611_i0 | PRJNA657343 | 43635 | 162 | 3.070796 | 4.97468952 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 169 | 1.28e-37 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g43611 | i0 | 85.802 | 291.808641975309 | 162 | 19 | 99 | 2 | 1 | 160 | 7089034 | 7089193 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 47273 | 169 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 18475487 | 18475487 | PRJNA657343_P_NODE_4595_length_357_cov_1.418831_g4572_i0 | PRJNA657343 | 4595 | 357 | 1.418831 | 5.06522667 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 202 | 1e-60 | NR | MBI4955806.1 | 2026763 | g4572 | i0 | 79.7 | 14.8739495798319 | 118 | 24 | 99.2 | 0 | 357 | 4 | 250 | 367 | MBI4955806.1 citrate (Si)-synthase [Myxococcales bacterium] | diamond | 5310 | 202 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 26923211 | 26923211 | PRJNA657343_P_NODE_9482_length_273_cov_3.727679_g9458_i0 | PRJNA657343 | 9482 | 273 | 3.727679 | 10.17656367 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 141 | 3.5899999999999998e-40 | NR | MBL4635072.1 | 2212474 | g9458 | i0 | 79.3 | 6.72527472527473 | 87 | 18 | 95.6 | 0 | 269 | 9 | 43 | 129 | MBL4635072.1 peroxiredoxin [Kofleriaceae bacterium] | diamond | 1836 | 141 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 27112806 | 27112806 | PRJNA657343_P_NODE_40522_length_165_cov_0.896552_g40498_i0 | PRJNA657343 | 40522 | 165 | 0.896552 | 1.4793108 | Aetherobacter fasciculatus | 888830 | Bacteria | Bacteria | 81.3 | 2.8e-16 | NR | WP_346369895.1 | 888830 | g40498 | i0 | 66 | 0.963636363636364 | 53 | 18 | 96.4 | 0 | 161 | 3 | 58 | 110 | WP_346369895.1 OmpA family protein [Aetherobacter fasciculatus] | diamond | 159 | 81.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Aetherobacter | Aetherobacter fasciculatus | |||
| 27555079 | 27555079 | PRJNA657343_P_NODE_19884_length_208_cov_1.270440_g19860_i0 | PRJNA657343 | 19884 | 208 | 1.27044 | 2.6425152 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 92 | 9.27e-20 | NR | MBL8684958.1 | 2026763 | g19860 | i0 | 78 | 1.48557692307692 | 50 | 10 | 70.7 | 1 | 3 | 149 | 114 | 163 | MBL8684958.1 M15 family metallopeptidase [Myxococcales bacterium] | diamond | 309 | 92 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 27650142 | 27650142 | PRJNA657343_P_NODE_40504_length_165_cov_0.896552_g40480_i0 | PRJNA657343 | 40504 | 165 | 0.896552 | 1.4793108 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 46.2 | 8.01e-4 | NR | HEY3353419.1 | 3058050 | g40480 | i0 | 55.9 | 0.618181818181818 | 34 | 15 | 61.8 | 0 | 156 | 55 | 324 | 357 | HEY3353419.1 bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein [Polyangia bacterium] | diamond | 102 | 46.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium | ||||||
| 28261955 | 28261955 | PRJNA657343_P_NODE_5286_length_339_cov_1.527586_g5263_i0 | PRJNA657343 | 5286 | 339 | 1.527586 | 5.17851654 | Bacteria | 2 | Bacteria | Bacteria | 50.4 | 2.22e-4 | NR | MDH5672412.1 | 2026763 | g5263 | i0 | 37.3 | 1.49557522123894 | 75 | 44 | 66.4 | 1 | 47 | 271 | 673 | 744 | MDH5672412.1 hypothetical protein [Myxococcales bacterium] | diamond | 507 | 50.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 29418029 | 29418029 | PRJNA657343_P_NODE_30469_length_178_cov_1.480620_g30445_i0 | PRJNA657343 | 30469 | 178 | 1.48062 | 2.6355036 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 99.8 | 1.48e-23 | NR | HMV66240.1 | 2818507 | g30445 | i0 | 78.2 | 5.56179775280899 | 55 | 12 | 92.7 | 0 | 9 | 173 | 42 | 96 | HMV66240.1 pirin family protein [Myxococcota bacterium] | diamond | 990 | 99.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 30902880 | 30902880 | PRJNA657343_P_NODE_1314_length_557_cov_4.102362_g1292_i0 | PRJNA657343 | 1314 | 557 | 4.102362 | 22.85015634 | Polyangiales bacterium | 3034171 | Bacteria | Bacteria | 53.9 | 9.58e-5 | NR | MFO0628135.1 | 3034171 | g1292 | i0 | 52.1 | 0.51705565529623 | 48 | 20 | 24.8 | 2 | 287 | 150 | 170 | 216 | MFO0628135.1 hypothetical protein [Polyangiales bacterium] | diamond | 288 | 53.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiales bacterium | |||||
| 30997713 | 30997713 | PRJNA657343_P_NODE_5054_length_345_cov_2.847973_g5031_i0 | PRJNA657343 | 5054 | 345 | 2.847973 | 9.82550685 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 76.6 | 1.54e-13 | NR | MFO0551775.1 | 2268199 | g5031 | i0 | 40.5 | 1.00869565217391 | 116 | 59 | 96.5 | 5 | 344 | 12 | 351 | 461 | MFO0551775.1 FAD-binding protein [Polyangiaceae bacterium] | diamond | 348 | 76.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31186905 | 31186905 | PRJNA657343_P_NODE_37875_length_167_cov_0.881356_g37851_i0 | PRJNA657343 | 37875 | 167 | 0.881356 | 1.47186452 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 50.1 | 3.44e-5 | NR | MEZ4234778.1 | 2818507 | g37851 | i0 | 55.3 | 0.844311377245509 | 47 | 21 | 84.4 | 0 | 161 | 21 | 129 | 175 | MEZ4234778.1 alkaline phosphatase D family protein [Myxococcota bacterium] | diamond | 141 | 50.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31547517 | 31547517 | PRJNA657343_P_NODE_14816_length_232_cov_1.573770_g14792_i0 | PRJNA657343 | 14816 | 232 | 1.57377 | 3.6511464 | Minicystis | 1649470 | Bacteria | Bacteria | 106 | 2.7200000000000004e-27 | NR | MFT3774947.1 | 1971901 | g14792 | i0 | 65.3 | 2.90948275862069 | 75 | 26 | 97 | 0 | 230 | 6 | 34 | 108 | MFT3774947.1 ERG2 family protein [Minicystis sp.] | diamond | 675 | 106 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;