RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA657343" and tax_phylum = "Candidatus Hydrothermarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrothermarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA657343 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27902422 27902422 PRJNA657343_P_NODE_4625_length_356_cov_2.110749_g4602_i0 PRJNA657343 4625 356 2.110749 7.51426644 Candidatus Hydrothermarchaeales archaeon 3107144 Archaea Archaea 95.1 3.39e-21   NR MFQ5887953.1 3107144 g4602 i0 45.8 2.62921348314607 107 55 89.3 2 36 353 19 123 MFQ5887953.1 30S ribosomal protein S4e [Candidatus Hydrothermarchaeales archaeon] diamond 936 95.1 1 Archaea   Methanobacteriati Candidatus Hydrothermarchaeota Candidatus Hydrothermarchaeia Candidatus Hydrothermarchaeales     Candidatus Hydrothermarchaeales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;