RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA657343", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA657343 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4451118 4451118 PRJNA657343_P_NODE_8104_length_289_cov_10.212500_g8080_i0 PRJNA657343 8104 289 10.2125 29.514125 Eukaryota 2759 Fungi Fungi 115 6.3000000000000005e-30   NR PJF19956.1 1246581 g8080 i0 66.7 3.2076124567474 75 25 77.9 0 287 63 115 189 PJF19956.1 hypothetical protein PSACC_00229 [Paramicrosporidium saccamoebae] diamond 927 115 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
24849196 24849196 PRJNA657343_P_NODE_19120_length_211_cov_1.234568_g19096_i0 PRJNA657343 19120 211 1.234568 2.60493848 Fungi 4751 Fungi Fungi 102 5.92e-25   NR EPZ35724.1 988480 g19096 i0 71.4 3.93838862559242 70 20 99.5 0 210 1 23 92 EPZ35724.1 Adenylate kinase [Rozella allomycis CSF55] diamond 831 102 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;