RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA657343" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 8 ✖

bioproject 1

  • PRJNA657343 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27460710 27460710 PRJNA657343_P_NODE_39983_length_165_cov_1.560345_g39959_i0 PRJNA657343 39983 165 1.560345 2.57456925 Tupanvirus soda lake 2126985 Viruses Viruses 85.1 1.41e-17   NR YP_010782185.1 2126985 g39959 i0 70.4 1.96363636363636 54 16 98.2 0 2 163 374 427 YP_010782185.1 peptidase inhibitor I9 [Tupanvirus soda lake] diamond 324 85.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
28060423 28060423 PRJNA657343_P_NODE_36565_length_168_cov_0.873950_g36541_i0 PRJNA657343 36565 168 0.87395 1.468236 Cotonvirus japonicus 2811091 Viruses Viruses 55.8 3.17e-7   NR YP_010841863.1 2811091 g36541 i0 51 1.85714285714286 49 24 87.5 0 8 154 939 987 YP_010841863.1 hypothetical protein QLL95_gp0868 [Cotonvirus japonicus] diamond 312 55.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Cotonvirus Cotonvirus japonicum
28849635 28849635 PRJNA657343_P_NODE_3828_length_383_cov_3.077844_g3805_i0 PRJNA657343 3828 383 3.077844 11.78814252 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 52 1.05e-4   NR YP_009449258.1 2023057 g3805 i0 34.8 1.51958224543081 92 52 68.1 5 78 338 162 250 YP_009449258.1 Domain of unknown function (DUF4114) [Orpheovirus IHUMI-LCC2] diamond 582 52 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
29102553 29102553 PRJNA657343_P_NODE_25068_length_191_cov_1.063380_g25044_i0 PRJNA657343 25068 191 1.06338 2.0310558 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 68.2 8.16e-12   NR YP_009449316.1 2023057 g25044 i0 63.6 0.691099476439791 44 16 69.1 0 186 55 204 247 YP_009449316.1 Fatty acid hydroxylase (C-5 sterol desaturase putative) [Orpheovirus IHUMI-LCC2] diamond 132 68.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
30966194 30966194 PRJNA657343_P_NODE_20474_length_206_cov_0.955414_g20450_i0 PRJNA657343 20474 206 0.955414 1.96815284 Terrestrivirus sp. 2487775 Viruses Viruses 107 1.54e-25   NR AYV76711.1 2487775 g20450 i0 72.7 8.60679611650485 66 18 96.1 0 199 2 12 77 AYV76711.1 MAG: hypothetical protein Terrestrivirus12_14 [Terrestrivirus sp.] diamond 1773 107 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.
31630003 31630003 PRJNA657343_P_NODE_36476_length_168_cov_0.873950_g36452_i0 PRJNA657343 36476 168 0.87395 1.468236 Klosneuvirus KNV1 1977640 Viruses Viruses 62.4 1.6e-9   NR ARF12058.1 1977640 g36452 i0 60.9 0.821428571428571 46 18 82.1 0 13 150 415 460 ARF12058.1 aminotransferase class-III [Klosneuvirus KNV1] diamond 138 62.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
31851251 31851251 PRJNA657343_P_NODE_35237_length_169_cov_0.866667_g35213_i0 PRJNA657343 35237 169 0.866667 1.46466723 Catovirus CTV1 1977631 Viruses Viruses 80.9 6.6e-17   NR ARF08362.1 1977631 g35213 i0 69.8 24.4615384615385 53 16 94.1 0 4 162 105 157 ARF08362.1 cyclophilin type peptidyl-prolyl cis-trans isomerase [Catovirus CTV1] diamond 4134 80.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus CTV1
32168006 32168006 PRJNA657343_P_NODE_44158_length_162_cov_0.920354_g44134_i0 PRJNA657343 44158 162 0.920354 1.49097348 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 58.5 8.14e-9   NR YP_009449036.1 2023057 g44134 i0 51.2 0.796296296296296 43 21 79.6 0 139 11 49 91 YP_009449036.1 Hypothetical protein ORPV_830 [Orpheovirus IHUMI-LCC2] diamond 129 58.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;